UFO07830.5prime Sequence
1118 bp (1028 high quality bases) assembled on 2011-07-14
> UFO07830.5prime
CAGTCGACATGAGCACGCGAAGACAGACCAGTCCTCTGAGGAATCTTCGC
CAGAAATGCGGCGGCAGTTGCACTAGTGACGATGACCTGCCTGAGGTCAA
GTTAATCACCCAGCCCATCAATGGTCTGCATTACATCCGGAATCGACTGA
GACCACCGAAATCCCGAAACGGCATTTACTACAGCACAGATTGGGACAAG
TCTGCGCTGGTCAGCAATTTCCAGAAAAGAGGTTGGCTACAGGTGCCCTC
CTTTAATGGCGAATGGAACTTCTATTGGGCGTGCACCCAGAATTGTCGCT
ACATCTTCGGCATCGATCATCCATATCGCATGCGATCAGATCAAGTCATT
AACCACTTCCCGAACTCCATTGAGCTGTCGCGCAAGGATTTGCTAATCAA
GAACATCAAGCGCTATCGCAAAGATCTGGAGCGACGTGGCGATCCGTTGG
CTCAAAGCCATCCACCGGATACGAAACTGGGCATAGGCGGTACCCGTTAC
AAGCACCTGGACATCATACCCATGACCTTTGTCCTCCCCTCCGATTACCA
AATGTTCGTCGAGGTCTTCCATCGCAATCCGGCCAGCACGTGGATAGTGA
AGCCATGCAGCAAGTCCCAGGGTGTAGGTATCTATCTGGTCAACAAGTTG
TCCAAACTGAAAAAATTCGCATACGATGCGCGCACCTTCTATCCGCAAAT
CAACCGGGACACCTGCGTCATTTCCAAGTACATCGACAATCCACTGCTGA
TCGGCGGCAAGAAATTCGACCTGCGACTCTTCGTCCTTGTGACCACATTC
AATCCGCTCAAGGCTTATCTCTATAAGAGGGTTTCTGCCGTTTTTGCACC
GAGAAGTACGACGAAACTGAGATTGATAACGTGTTTATGCACTTGACGAA
CGTCAGCATCCAGAAAACGAATCAAGAGTACATTCCATCCATGGTGGCAA
ATGGCCCCTCCAGAATCTGTGGCTGTACTTGGACAGCCTGCGAGGCGAGG
GCGTTTCGGATATGCTTGTGGAGCCGCATCACCGCCAACCATCAGACTTC
CTTGGACGCCAGTGGCTCCGGTGATGCCAACGATCGTTCATTGTTCAGGT
CTATGCCATTGACATTAT
UFO07830.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:29:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8918-RA | 1630 | CG8918-RA | 81..1189 | 9..1115 | 5225 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:29:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17201553..17202132 | 922..344 | 2850 | 99.8 | Minus |
| X | 23542271 | X | 17202184..17202518 | 343..9 | 1675 | 100 | Minus |
| X | 23542271 | X | 17201253..17201407 | 1087..932 | 495 | 94.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:29:06 has no hits.
UFO07830.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:22 Download gff for
UFO07830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8918-RA | 74..1189 | 1..1115 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:53 Download gff for
UFO07830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8918-RA | 74..1189 | 1..1115 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:26 Download gff for
UFO07830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8918-RA | 74..1189 | 1..1115 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:26 Download gff for
UFO07830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17201249..17201417 | 923..1091 | 93 | <- | Minus |
| X | 17201553..17202132 | 344..922 | 99 | <- | Minus |
| X | 17202184..17202525 | 1..343 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:53 Download gff for
UFO07830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17095282..17095450 | 923..1091 | 93 | <- | Minus |
| arm_X | 17095586..17096165 | 344..922 | 99 | <- | Minus |
| arm_X | 17096217..17096558 | 1..343 | 98 | | Minus |
