UFO07834.5prime Sequence
1141 bp (1014 high quality bases) assembled on 2011-07-14
> UFO07834.5prime
CAGTCGACATGCTGAATTCCCTGGACAACCTGGAGGATTGCGAGGAGATC
TACACTCGCGAGATGCACGATATGAACATTGGCGTTGGAGAAGGAACCGT
TCCATGCTGGGTGTACCTGCTGCAGAAGTACCCGGAGAACCTACTTAGTC
TGCGCTACTTGTCCAGCTACGAGAACTCAACCACCCATCCATACATTATG
CGCCATCGCCGCACCCACAAGCATCCGGCCCAGGACGACCTCACCTACGA
GGCCCAGAACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGG
TAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCT
AGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGC
CCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCA
TTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGC
CCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGC
CGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGC
ATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGG
GGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAAC
TCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTA
GGGAAATAGGCCAGGTTTTCACCGTACACGCCACATCTTGCGAATATATG
TGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAA
CGTTTCAGTTTGCTCATGGAAACGGTGTAACAAGGGTGAACACTATCCCA
TATCACCAGCTCACCGTCTTTCATTGCCATACGAATTCCGGATGAGCATT
CATCGGGCGGGCAGAATGGTGATAAGGCCGGATAACTTGTGCTATTTTTC
TCTTACGGCTTTAAAAGGCCGTAATATCAGCCTGACGGCCTGGTATAGGT
ACATGGAGCACTGACTGAATGCCTCAAAAGGTTCTTTCATGGCATGGGAA
TAATACAACCGGGATATTCAGGAATTTTTTCCATTACTCTA
UFO07834.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:28:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tina-1-RB | 1429 | CG2803-RB | 914..1165 | 9..260 | 1260 | 100 | Plus |
| Tina-1-RA | 914 | CG2803-RA | 399..650 | 9..260 | 1260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:28:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24940889..24941055 | 260..94 | 835 | 100 | Minus |
| 2R | 25286936 | 2R | 24941122..24941207 | 94..9 | 430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:28:37 has no hits.
UFO07834.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:17 Download gff for
UFO07834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tina-1-RB | 896..1157 | 1..264 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:36 Download gff for
UFO07834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tina-1-RA | 392..653 | 1..264 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:11 Download gff for
UFO07834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tina-1-RA | 392..653 | 1..264 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:11 Download gff for
UFO07834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24940889..24941054 | 95..260 | 100 | <- | Minus |
| 2R | 24941122..24941212 | 1..94 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:36 Download gff for
UFO07834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20828412..20828577 | 95..260 | 100 | <- | Minus |
| arm_2R | 20828645..20828735 | 1..94 | 96 | | Minus |
