UFO07836.5prime Sequence
942 bp (940 high quality bases) assembled on 2011-07-14
> UFO07836.5prime
GCCGCATTGGGTCCAATCCTGCAAAGAAATCGTAGCGAAATCATCCAAAA
ACAATCTTTGACCAATCGACAGGCATTCCGCAGATACAGATCCAGCTGCA
GCACCATGGACACCACCGTTCACTCCGCCGGCATCGATGAGACCCACCTG
GTGCCCATGAGCGTCATCCAGCGACCCATTCCCTCCGTCCTGGACGAGCA
GAAGGTGCAATCCCTGATGGAAACCATTAAGAACGAAACCAGCGAAGATG
AGGTGCCCCCCATCGACCTGCTGTGGATCTCGGGCAGCGAGGGAGGCGAC
TACTACTTCAGCTTCGGCGGATGCCACCGGTTCGAGGCGTACAAGCGGCT
ACAGCGGCCGACGATCAAGGCGAAGCTGGTGAAGTCCACACTGGGCGATC
TGTATCACTACATGGGCTCCAGCGCGCCCAAGTACCTGGCCGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACA
AACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAGTTGTCATATT
GGCCCACGTTTAATCAAACTGTTGAACTCACCAGGGATTGCTGAAACGAA
AACATATCTCAATAAACCCTTTAGGAAATAGGCCAGTTTTCC
UFO07836.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:28:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6762-RA | 984 | CG6762-RA | 195..635 | 1..441 | 2205 | 100 | Plus |
| CG6762-RB | 921 | CG6762-RB | 362..749 | 54..441 | 1940 | 100 | Plus |
| CG6762-RC | 788 | CG6762-RC | 195..616 | 1..441 | 1910 | 95.7 | Plus |
| CG6762-RB | 921 | CG6762-RB | 195..247 | 1..53 | 265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:28:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17858050..17858261 | 230..441 | 1060 | 100 | Plus |
| X | 23542271 | X | 17857473..17857650 | 54..231 | 890 | 100 | Plus |
| X | 23542271 | X | 17857306..17857358 | 1..53 | 265 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:28:45 has no hits.
UFO07836.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:19 Download gff for
UFO07836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6762-RA | 137..585 | 1..450 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:40 Download gff for
UFO07836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6762-RA | 195..643 | 1..450 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:14 Download gff for
UFO07836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6762-RA | 195..643 | 1..450 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:14 Download gff for
UFO07836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17857306..17857358 | 1..53 | 100 | -> | Plus |
| X | 17857473..17857650 | 54..231 | 100 | -> | Plus |
| X | 17858052..17858261 | 232..441 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:40 Download gff for
UFO07836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17751339..17751391 | 1..53 | 100 | -> | Plus |
| arm_X | 17751506..17751683 | 54..231 | 100 | -> | Plus |
| arm_X | 17752085..17752294 | 232..441 | 100 | == | Plus |
