UFO07838.5prime Sequence
1132 bp (1029 high quality bases) assembled on 2011-07-14
> UFO07838.5prime
CAGTCGACATGCATCATCACCAGAATCTCGGAGACGCGGCCGCCATGAAT
GGAATGATCCCGCCATACGAAGCCATGGCTATGTACGAGCAGCCCAAGCC
CAGATTCATCTTCAAGATGCCCCGCGTGGTGCCTGACCAGAGGTCCAAGT
TCGATAGCGACGAGCTCTTCCGCCGATTGAGTAGGGAGAGCGAGGTTCGC
TACACAGGATACCGGGAACGTGCAATGGAGGAGCGCAGGATGCGGTTTGT
CAACGACTGCCGCAAGGGCTATGCGGAGATATCGATGGTAGCTTCAGGAA
CTAATCTGCAGCTCTACTTCAACGCCAACCACAATCCGTACGCCCAGGAG
CAGGATTGCGATTTCGAGCGGGAGCGGGGCAAAGTTCATTTGCGTTCTAG
TTTCATCATGAACGGGGTGTGCGTCCGCTTCCGGGGCTGGGTGGATCTGG
ACCGACTGGATGGCGCTGCCTGCCTGGAGTTCGATGAACAACGAGCCCAG
CAGGAGGATGCTCAGCTGCAGGAGCAGATTCAAAGCTACAACCAGCGCAT
GGCTGAGTCCAGGAGAATCTACCACACGCCCCAGACTCCACCCGAGGATC
ACCATCACAGAGGTGGGCCTGGTCTGCCTAGAGGACCAATGGGATGGGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGT
CATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCG
AGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTAT
CAACAGGAGTCCAAGCGAGCTCGATATCAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTGTAATTCATTAGCATTCTGCCGACATGGAAGCCAT
CACAAACGCATGATGACCTGAATCGCAGCGGCATCAGCACTTGTCGCCTT
GCGTATATATTTGCCATGGTGAAACGGGGGCGAGAGTTGTCCAATTGTCA
CGGTTAATCCAACTGGTGAACTCACCAGGATGCTGAACGAAACAATTCTC
ATAACCCTTAGGAATGGCAGGTCACGTAACGC
UFO07838.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:29:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bro-RA | 744 | CG7960-RA | 34..675 | 6..647 | 3210 | 100 | Plus |
| Bgb-RB | 1242 | CG7959-RB | 337..802 | 82..547 | 470 | 75 | Plus |
| Bgb-RA | 1242 | CG7959-RA | 337..802 | 82..547 | 470 | 75 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:29:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1647902..1648543 | 6..647 | 3210 | 100 | Plus |
| 3L | 28110227 | 3L | 1640047..1640512 | 82..547 | 425 | 72.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:29:29 has no hits.
UFO07838.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:26 Download gff for
UFO07838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bro-RA | 29..675 | 1..647 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:07 Download gff for
UFO07838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bro-RA | 29..675 | 1..647 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:37 Download gff for
UFO07838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bro-RA | 29..675 | 1..647 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:37 Download gff for
UFO07838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1647897..1648543 | 1..647 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:07 Download gff for
UFO07838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1647897..1648543 | 1..647 | 99 | == | Plus |
