UFO07843.5prime Sequence
830 bp (825 high quality bases) assembled on 2011-07-14
> UFO07843.5prime
CAGTCGACATGGTTCTCAGCTCTGAGCTGCTCCAGGATGCCCTGCGGTCC
AGCAACAAGCTTCTATTCGAATGCTATGGCAGCCTGATCAGATGCTATCA
GGAGTGCGTTGAACTTCGCAAGGATAACAAGGATCGGACTAAGAGCCAAG
ACTACTGGGATGCAGAGTTTGTAGGTTCTGTGATCAAGCAGCTGGCAGAG
ATGGTTCGCCGCTCTCAGGAGCCTGAAAAGCTGTTAGAAGAGAACAATTC
GAAAACTGTTCGTCCTCTTGTCACTCGTGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAAACGGCATGATG
AACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATT
TTGCCCATGGTGAAAACGGGGGGCGAAGTAGTTGTCCATATTGGCCACGT
TTAAATCAAAACTGGTGAAAACTCACCCCAGGGATTGGCTGAGACGAAAA
ACTTATTCCTCAATAAACCCCTTTAGGGAATTAGGGCCAGGTTTTTCACC
GTTACCCGCCACCATCTTGCAAATATATGT
UFO07843.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:29:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18273-RA | 4342 | CG18273-RA | 419..682 | 8..271 | 1110 | 94.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:29:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 481233..481502 | 277..8 | 1350 | 100 | Minus |
| X | 23542271 | X | 486839..487102 | 271..8 | 1110 | 94.7 | Minus |
| X | 23542271 | X | 478950..479011 | 75..14 | 280 | 96.8 | Minus |
| X | 23542271 | X | 478840..478906 | 271..205 | 245 | 91 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:29:49 has no hits.
UFO07843.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:30 Download gff for
UFO07843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18273-RA | 387..655 | 1..271 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:16 Download gff for
UFO07843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18273-RA | 414..682 | 1..271 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:47 Download gff for
UFO07843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18273-RA | 414..682 | 1..271 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:47 Download gff for
UFO07843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 481233..481507 | 1..277 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:16 Download gff for
UFO07843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 375266..375540 | 1..277 | 98 | | Minus |
