UFO07855.5prime Sequence
1124 bp (1029 high quality bases) assembled on 2011-07-14
> UFO07855.5prime
CAGTCGACATGTTTAGGAAGTCCAGGCCCAAAGTAGAGCCTCCACCCACG
GCTCCCAGTGTAGAGGAAATGCTGGCGGACATGGAAACGTTCGAGGTCAA
TCAGCCTACGATAAGCGGATCTACAGACAACTTGGACTTGGAGCACGCTT
TCATGACTGAACCAGAGAATCTTCCCCTTTCAACATGGTGGCAGATGTTC
GACGAGTACGATCAGAAGGTGAAGAAACTGTCGGCCACCGTGGGAGATCT
GGAGACCCAACGAAATCAGTTAAAAGAATGCTATGCGAAGCTGGAAAATA
ACGCGGATAAACTGAGAACGGACATCCAAAAGCAGCAGGCACTGGTCAAA
GAAGCCCTTAAATGTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGA
GGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAAT
TACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCAT
TCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCA
GCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAA
ACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGT
GAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACC
CTTTAGGGAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAAT
ATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCAGAGCGATG
AAAACGTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGTGAACACTATC
CCATATCACCCAGCTCAACCGTCTTCATGCCATACGAATTCCCGGATGAA
CATTCCTCAGGCGGCAAGAATGGTATAAGGCCGGATAAACCTGTGCTATT
TTTCTTACGACTTTAAGCGTAAAT
UFO07855.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:30:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18731-RB | 615 | CG18731-RB | 180..536 | 9..365 | 1785 | 100 | Plus |
| CG18731-RA | 600 | CG18731-RA | 165..521 | 9..365 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:30:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29725255..29725611 | 9..365 | 1785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:30:21 has no hits.
UFO07855.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:35 Download gff for
UFO07855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18731-RA | 159..530 | 1..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:34 Download gff for
UFO07855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18731-RA | 159..530 | 1..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:01 Download gff for
UFO07855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18731-RA | 159..530 | 1..375 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:01 Download gff for
UFO07855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29725249..29725611 | 1..365 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:34 Download gff for
UFO07855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25550971..25551333 | 1..365 | 99 | == | Plus |
