UFO07858.5prime Sequence
1091 bp (1018 high quality bases) assembled on 2011-07-14
> UFO07858.5prime
CAGTCGACATGGAACGCTGGCATGATCGCGTGGCTGTGGTCACGGGTGCC
AGCTCCGGGATAGGAGCTGCAGTGGCACGCCACTTGGTGAGTGCAGGGGT
CATTGTTGTAGGTCTGGCCCGTCGGGTCGACCGCATGAAGGCTATCAAGG
AACAACTGCCGCCGGAGCTGCAGGGCCGCCTGCATGCCATCCACTGCGAT
GTCGAAGATCTGGACTCGGTGACGGCTGCCTTTGACTGGATCGAGGAGCA
GCTCGGCGGATGTGACATCCTGGTGAACAACGCGGGATGCCTGAACCCCG
GACAACTTCTCACCCTGGAGCTAGAGCAGCTGCAGCAGGTCCTGAACGTG
AACTTGATGGGCGTGGTCATCTGCACCCGCCGCGCCTTTCGCTCAATGCA
GCAACGCGAGGTGGATGGCCATGTGATCCTCATTAACAGCCTAACGGGCC
GTAACATCATCAATCCACCTGGTGACGAGCTGCAGGTGCTCAACATGTAT
CCGCTTACCAAGCACGGGGTTACGGCCATGTTGGAAGTCCTGCGACAGGA
GCTGCGCGGATTCAAGACTAAGATAAAGGTCACAGTGAGTGCACAAAAAT
CGATCAAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
CGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
ACATGGAGGCATCACAAACGGCATGATGAACCTGAATCCGCCAGCGGCAT
CAGCACTTGTCCGCCTTGCGTATAATATTTGCCCAATGGTGAAAACGGGG
GCGAAAAGTTGTCCAAATTGCCACGTTAAATCAAATGGGTGAACCCACCC
AGGGATTGGCTGAACGAAAACATAATCTCAATAAACCCTTA
UFO07858.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:30:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40486-RC | 960 | CG40486-RC | 127..702 | 9..584 | 2880 | 100 | Plus |
| CG40486-RB | 940 | CG40486-RB | 127..702 | 9..584 | 2880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:30:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 22959366..22959965 | 608..9 | 3000 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:30:01 has no hits.
UFO07858.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:32 Download gff for
UFO07858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40486-RA | 112..711 | 9..608 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:22 Download gff for
UFO07858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40486-RA | 112..711 | 9..608 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:52 Download gff for
UFO07858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40486-RB | 127..702 | 9..584 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:52 Download gff for
UFO07858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 22959366..22959965 | 9..608 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:22 Download gff for
UFO07858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 22361202..22361801 | 9..608 | 100 | | Minus |
