UFO07861.5prime Sequence
1116 bp (1022 high quality bases) assembled on 2011-07-14
> UFO07861.5prime
CAGTCGACATGGTGGTTATCAAGAAGGACAGAGGAATGGCTTCAAATCTC
CAACAGGCAATTCGAACGCATGGTTTTATTTCACTATACGATGGATTAAG
TGCCCAGTTATTGAGACAGCTGACATACACCTCGATGCGGTTTCACCTGT
ACGAAATGGGAAAGGAGCACCTGGATGATCCTGCTGGTTTGTTGGACAAA
GTGCTGGTGGCTGCATTGGCTGGTTGTGTGGCTGGTGTGGTGGGTACACC
CATGGAGTTGATCAACACCCGGATGCAGGTCAATCGCGCGCTGCCCAAGG
AAACGCGGTGGAACTATCGAAACGTCTTCGATGGACTGTACCGTGTGACC
AGGGAAGAGGGCTTTACGAAGCTGTACAGCGGATGTTTCCTCTCCTTTAT
GCGGTCCAGCCTCATCACCATCAGCCAAAATGCTGCTTACGATCAGGCCA
AGCAGATCTACGCAGAATTTTTTCACATGAAGCACGACAACACATTGCTG
CACCTGATAAGTTCCGTGACGGCTGCTTTCGTCTGCGGTCCAATCATCAA
GCCCATTGAGAACTTGAGATACCTCAGAATGGTGGATTCAAGAAGATTGA
TAAATTCCATTTCCTATATGATGCGCTTCGGAAGTCGCGGACCTTTTCGC
GGTATGGTGCCCTATGTTTTGCGCATGGTACCCAATACGGTCATTACTTT
TTTAAGTTTCGAGCAGCTTCGTGTTAATTTTGGGTACATTGAAATTGAAG
ATGATGAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGTCATTAC
TGGATCTATCAACAGAGTCCAAGCGAGCTCGAAATCAAATTACGCCCCCG
CCCTGCCACCTCATCGCAGTACTGGTGTATCATAGCATTCTGCTGCCGAA
CATGGAGGCCATCCAAAACGCATGATGAACTGATTCGCCAGGCGCATACA
GCATCCTTGGTCCCTT
UFO07861.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:30:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6893-RB | 1164 | CG6893-RB | 284..1033 | 9..758 | 3750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:30:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18694767..18695142 | 72..447 | 1880 | 100 | Plus |
| 3L | 28110227 | 3L | 18695203..18695517 | 444..758 | 1575 | 100 | Plus |
| 3L | 28110227 | 3L | 18694524..18694589 | 9..74 | 330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:30:39 has no hits.
UFO07861.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:38 Download gff for
UFO07861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6893-RB | 279..1033 | 1..758 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:43 Download gff for
UFO07861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6893-RB | 279..1033 | 1..758 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:09 Download gff for
UFO07861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6893-RB | 279..1033 | 1..758 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:09 Download gff for
UFO07861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18694519..18694587 | 1..72 | 95 | -> | Plus |
| 3L | 18694768..18695141 | 73..446 | 100 | -> | Plus |
| 3L | 18695206..18695517 | 447..758 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:43 Download gff for
UFO07861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18687619..18687687 | 1..72 | 95 | -> | Plus |
| arm_3L | 18687868..18688241 | 73..446 | 100 | -> | Plus |
| arm_3L | 18688306..18688617 | 447..758 | 100 | == | Plus |
