UFO07862.5prime Sequence
1134 bp (1017 high quality bases) assembled on 2011-07-14
> UFO07862.5prime
CAGTCGACATGACGACAACGCTGCCGGAGAAGGAAGCGGAAACGCAGCAG
GAGATCAGGGAGCGGGAGGCCAAGGCTCTGGAGGACCGAAAGGAGCGCAA
GATCTACGAGAACTTTGCCACGCCCCTGGCAGGCACTTTTCTCAACCTGC
CACGCGAGCCCGTGGAGATCGAGTGCCCCGCCTGCGGAATCAAGGATCTG
AGTGTGGTGCAAAATGATCTGAAGTGGTGGGCCAGTGAACTAAACCGCAT
TGTGGGATGTCTTTTTGTGACCTTCTGCTGCTGCTGCTGCTTTAATTACT
ATGTGCCGTGCAAACAAACCGATCGAAGTCATTACTGCGGCAATTGCGGC
TGTTACTTTGGACGTTCCATGAAGAGGAGGCAACCACTCAAATTGAAGGC
AACCACCGCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGG
TAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCT
AGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGC
CCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCA
TTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGC
CCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGC
CGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGC
ATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGG
GGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAACTGGTGAAACT
CACCCAGGGATTGGCTGAGACGAAAACATATTCTCAATAAACCCTTTAGG
GAAATAGGCCAGGTTTTCACCGTACACGCCACATCTTGCGAATATATGTG
TAGAAACTGCCGGAAATCGTCGTGTATTCACCTCAGAGCGATGACACGTT
TCAGTTTGCTCATGGAAAACGGTGTAACAGGTGACACTATCCATATCACC
AGCTCACGTCTTTCATGCAACCGAATTCCGGATTGACATCATCAGGCGGC
AGATTGATAGGGCGAATAACTGCTATTTCCTTAC
UFO07862.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:30:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34445-RA | 527 | CG34445-RA | 25..427 | 8..410 | 2015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:30:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22648193..22648454 | 269..8 | 1310 | 100 | Minus |
| 2R | 25286936 | 2R | 22647992..22648133 | 410..269 | 710 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:30:43 has no hits.
UFO07862.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:38 Download gff for
UFO07862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34445-RA | 13..427 | 1..416 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:46 Download gff for
UFO07862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34445-RA | 18..432 | 1..416 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:10 Download gff for
UFO07862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34445-RA | 18..432 | 1..416 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:10 Download gff for
UFO07862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22647992..22648133 | 269..410 | 100 | <- | Minus |
| 2R | 22648194..22648460 | 1..268 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:46 Download gff for
UFO07862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18535497..18535638 | 269..410 | 100 | <- | Minus |
| arm_2R | 18535699..18535965 | 1..268 | 98 | | Minus |
