UFO07871.5prime Sequence
1062 bp (970 high quality bases) assembled on 2011-07-14
> UFO07871.5prime
CAGTCGACATGCCCCGCCAACGTTCGGAAGGGCCGCGATCCACAGGATCT
ATGCGGCGCCAAAGCAGCCGGAGCAGCCATGTCTTCGCCACAAAGCCGTC
TCGTGGGAGCAGCAAGGATCTGCCGGCTGTGCAGCAGCCCAAGAAGGAAT
CCCTGCCAGCTGCAGCTCCTGCTGCCTCGGCAGCCACCTCCACAGAGACA
AAAGGTCCTAGCACAGCAGATAGGTTCAAGGACATGGCCACCACGGCGGC
TGGCGTGGCAGCAGGATCAGCTGTGGGCCACGCTGTGGGCGCAGGACTCA
CGGGAATGTTCCAGGGACGTGGTCAGGCAGCCCCGGCCAAGGAGCAGCCT
CAACAGGAGGGATCCTTGGCAGCTTCAGCTTCGCAATCAGTACCGAAACC
TCAACTAGTGGAGGATGGTCCCTGCGCCTTCGAGCTGAGGCAGTTCCTCA
AGTGCACCGAGGACAACAGCAGTGATCTCTCCGTTTGCAAGGAGTTTAAC
GAGGCAATGCAGCAGTGTCGGCGGCGCTATAATGTCGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATA
ATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTG
CTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAA
CAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTC
CAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTA
CTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAACGGC
ATGATGAACCTGATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATA
TATTTGCCCATGTTGAAACGGGGCGAGAGTGTCATATTGTACGTTAATCA
AACTGTGAACTCACCAGGATGCTGAAACGAAAAACATATTCTTCAATACC
TTTAGAAATAGCCAGCTTTCACGTAACGCCAATCTGCCATATATAGTGTA
GACTGCGAAATC
UFO07871.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:30:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31007-RA | 758 | CG31007-RA | 41..568 | 9..536 | 2640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:30:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30991890..30992417 | 536..9 | 2640 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:30:35 has no hits.
UFO07871.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:37 Download gff for
UFO07871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31007-RA | 35..568 | 1..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:41 Download gff for
UFO07871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31007-RA | 35..568 | 1..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:07 Download gff for
UFO07871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31007-RA | 35..568 | 1..536 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:07 Download gff for
UFO07871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30991890..30992422 | 1..536 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:41 Download gff for
UFO07871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26817612..26818144 | 1..536 | 99 | | Minus |
