UFO07873.5prime Sequence
1093 bp (999 high quality bases) assembled on 2011-07-14
> UFO07873.5prime
CAGTCGACATGTCGGATTTGGGGAAAGATGTGGCGAGCGAAGAAGGCTCC
AATGGAAGCAGGGAAACCATTTGGTACACCATTGGAGAGCTTGTGGAAAT
GGTCGAGTGTCCAGGTTGTGGAATATCCATGGTATCGTTCAAAAATCGCT
TCGCCCACATCAAGAAGTGCTTCAGCATCAAGAGACGAGGTCCTTTGTAC
AGGATTTATGGATATGCGGAGTGCAAGTGCGGCTTTCTTATTGCAGACAC
GGAAAAAGCCCGGAAACTGCATTGTTGTTCGGGAAAACTTCGCCCCTGCA
AGCCAATCATACCAACTGAGCCGAAAGTCCCGGTGACAAAACATGCTGAA
GAACTAACATCAACTAAAAGGGAACAGGCTTTGCAGCCGTTGATTAGAAA
TTTTATCAGTCCCATCAAACAACAGGAGTTTCCATCTTTGGATATATCAT
ATTCCAGTAAATATGATCCTAAACCAACATCGAGGCCACGCGTCCGTAAC
TTTGATAGACCACACAGAAGTCAAGCTCCAAAGGAAGTCTGTGTGTACTC
CATAATTCGGAGGAATGGGGCTATCTCAGTGACAGGAAGATCCATCGTTA
GGTACCGGGGTGGCAACGAAAACCTTGCCATACTTAAAAGGCGAGAATTA
AAAATAAAATACGTAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAATCCAGATGGAGTTCTGAG
GTCATTACTGGATCTATCACAGGAGTCCAAGCGGAGCTCGATATCAATTA
CGCCCCGCCCTGCCACCTCATCGCCAGTACTGTTTGTAATTCATTAAGCA
TTCTGCCGACATGGAAAGCCATCACAAACGCATGAATGAACCCTGAATTC
GCCAGCGGCATCAGCCCCTTGTCGCCTTGCCGTATATATTTGCCATGCTG
AAAACGGGGCCTAGAAGCTGTCCTATTGCACGGTTAATTCAGA
UFO07873.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:31:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30096-RB | 1130 | CG30096-RB | 159..815 | 9..665 | 3285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:31:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16321130..16321514 | 665..281 | 1925 | 100 | Minus |
| 2R | 25286936 | 2R | 16321565..16321819 | 286..32 | 1260 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:31:09 has no hits.
UFO07873.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:42 Download gff for
UFO07873.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30096-RB | 103..766 | 1..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:59 Download gff for
UFO07873.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30096-RB | 155..818 | 1..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:21 Download gff for
UFO07873.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30096-RB | 155..818 | 1..669 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:21 Download gff for
UFO07873.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16321127..16321513 | 282..669 | 99 | <- | Minus |
| 2R | 16321570..16321818 | 33..281 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:59 Download gff for
UFO07873.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12209075..12209323 | 33..281 | 100 | <- | Minus |
| arm_2R | 12208632..12209018 | 282..669 | 99 | <- | Minus |
