UFO07874.5prime Sequence
1128 bp (1026 high quality bases) assembled on 2011-07-14
> UFO07874.5prime
CAGTCGACATGTGCGAACAGTACTGTGACAAGTTTGAGACCTTCAATCCG
GAGGTTGAGTTTGCCAAGTTTCAAAAACGCAAGCCTGTCGTAAGGACTGC
CCAACTCTATGAGAATTTGCACAAGCGGGAGGATATCAAGTGTCCCTACA
GCTTCAAAGGTTATGGCGTGGAGACGGATTCCAATACAATGTACCGCACT
TGCAACTCCGAATATGGTTACTATGCACCCAATGCCTATACCATACCCAA
GCGTTTCTATCCATTGCCCCAGAGTTTCTCCAATGAAGTCGTGCGTTTCG
GCATGTATCGCAATTTCTCCCTGAACACACATATGGATCGTACCTTCTAT
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATC
TATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGC
CACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAA
GCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCT
TGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAG
TTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGG
ATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGG
CCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAAC
TGCCGGAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTT
TGCTCATGGAAAACGGTGTAACAAGGGTGAACCACTTATCCATATCACAG
CTCACGTCTTTCATTGCATACGAAATTCAGGATGAGCATTCATCAGCGGG
CAAGAATGTGAATAAAGCCGATAAAACCTGGGCCTAACTCTACCGCTTTA
AAGGGCGTATATTCCACCTGAACGGCTG
UFO07874.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:31:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34107-RA | 611 | CG34107-RA | 58..399 | 9..350 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:31:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10225173..10225375 | 148..350 | 1015 | 100 | Plus |
| 3R | 32079331 | 3R | 10224966..10225104 | 9..147 | 695 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:31:13 has no hits.
UFO07874.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:43 Download gff for
UFO07874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34107-RA | 51..399 | 1..350 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:01 Download gff for
UFO07874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34107-RA | 51..399 | 1..350 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:23 Download gff for
UFO07874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34107-RA | 51..399 | 1..350 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:23 Download gff for
UFO07874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10224959..10225104 | 1..147 | 97 | -> | Plus |
| 3R | 10225173..10225375 | 148..350 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:01 Download gff for
UFO07874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6050681..6050826 | 1..147 | 97 | -> | Plus |
| arm_3R | 6050895..6051097 | 148..350 | 100 | == | Plus |
