UFO07886.5prime Sequence
1101 bp (1006 high quality bases) assembled on 2011-07-14
> UFO07886.5prime
CAGTCGACATGCGCGTACCCGGAGCCCTGTTTGCCGCGCGCGGCCGAGCG
CCTCAAAGCGAGAAGGACGTGCCCTTCCAGGAGATTCTGCCTCTGCGGCT
GAAGAACACCGTGAGCGGGAAGGCGGACTCCGGATCCGATGTGGCCTGTC
TCCAGGAGATGGGCGTGCTGTTCGCCTGCTTGAAAGACAACGAATTCGTG
GAGAAGTACTGCCACAAGGAGATCAGCCAGTTCCAGAACTGCTACAAGTG
CTACATGGACCGTAAGTTTGAGGCGAAGAAGACCGTGAACCAGGGAATCG
TCCAACCGGGCAGCAACCTGAACTACAAGCAACTTAACAAGTACATGCGC
CGCTACCCCAATCCCGTAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC
TGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCA
AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG
CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCG
CCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTG
AAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACT
GGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAA
ACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTACACGCCACATCTTGCG
ATATATGTGTAGAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGAT
GAAACGTTTCAGTTTGCTCATGAAACGTGTACAGGTGAACACCTATTCCC
ATATCACAGCTCACCGTCTTCATGCATACGAAAGTCCGATGACATTCATC
AGCGGCCAGAATGTGATAAAGCCGGAATAAACTGTGCTTATTTCTACGCT
A
UFO07886.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:31:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12848-RA | 469 | CG12848-RA | 59..422 | 5..368 | 1805 | 99.7 | Plus |
| CG12848-RB | 478 | CG12848-RB | 72..431 | 9..368 | 1800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:31:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24762613..24762972 | 368..9 | 1800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:31:29 has no hits.
UFO07886.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:46 Download gff for
UFO07886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12848-RA | 42..423 | 1..381 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:10 Download gff for
UFO07886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12848-RA | 54..435 | 1..381 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:28 Download gff for
UFO07886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12848-RA | 54..435 | 1..381 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:28 Download gff for
UFO07886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24762613..24762976 | 4..368 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:10 Download gff for
UFO07886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20650136..20650499 | 4..368 | 99 | | Minus |
