UFO07895.5prime Sequence
1073 bp (990 high quality bases) assembled on 2011-07-14
> UFO07895.5prime
CAGTCGACATGGAATTATTTACTGTTAACAGATATACCGAGGATTTGAAA
GAACAAAAAGATGGGGCCCAAGGCACCAACAACGAGGATGAAATACTGCA
AAAATTGCTTAAGAAGGCTGCAAAACGCAAAAGGAAACATGAAGCCATAG
AAGTTGTAGAAACACCAATCCTGGAAAAAGAAACCTCAGATGTGAAGGAG
TCGGAATCCAAGGAGGAGCAGGTGGAAGAACCAGAAAAGCCCCTAGAAGT
TGTCCAAGAGGAAGATGTTCCGTCTAATGAGTTTCAAGTTCTTGGAGGCG
ATGATTCGGCGGCCAAGAAGAAGAAAGTGCAGATGCAGCTGCCCAATTGG
CTGGCACATCCAACCATCATTGAAGGTGGAAGCCTGCAGCCGGAGGAGGA
AGTGCCCGCCTCCGAGGCAATTGACCAGCTCGATTACCTGGAGAAGTACA
CATGTCAAGCTCTCAAGCAGATGAAGATTAAGCGGCTTTTTCCAGTCCAA
AAGCAGGTCATCCCATGGATCCTGGAGGCACACGCTAAGCCTCCTCCCTT
TCGTCCCCGAGATATTTGTGTATCTGCTCCTACAGGCAGTGGAAAAACCT
TGGCCTTTGCCATACCAATTGTCCAGTTGCTATCGCAGCGGGTGGATTGT
AAAGTAAGGGCTTTAGTCGTCCTTCCTGTGGCAGAGCTGGCCCTACAGGT
TTATCGGGTCATCAGTGAGTTGTGCAGCAAAACGGAGCTGGAGGTTTGCC
TTCTATCCAAGCAGCACAAACTAGAGGATGAGCAGGAGAAGCTGGTGGAG
CAATACAAAGGCAAATACTACTCCAAGGCAGACATTGTGGTGACCACACC
AGGCCGCTTGGTTGACCATTTGCACGCCACGAAAGGGTTCTGCCTGAGAG
CCTAAAATTTCTGGTCATTGACGAGCGATCGATATGATGCAGTTTCAAAA
CTGGCCTTTATCATCTGACAGTCATGTAAAGAAACACGACCAGCTGCTGG
CGACTCAGCACCTCTTATGCTATGCCGACTCAGCAGCTTTGCAAGCAACC
CATAAGCTCTGTTCCGCGACTGT
UFO07895.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:27:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbp73D-RA | 2209 | CG9680-RA | 85..1161 | 9..1064 | 4785 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:27:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16729836..16730660 | 853..29 | 4125 | 100 | Minus |
| 3L | 28110227 | 3L | 16729703..16729779 | 925..850 | 335 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:27:17 has no hits.
UFO07895.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:04 Download gff for
UFO07895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dbp73D-RA | 70..1098 | 3..1015 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:52 Download gff for
UFO07895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dbp73D-RA | 78..1106 | 3..1015 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:39 Download gff for
UFO07895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dbp73D-RA | 78..1106 | 3..1015 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:39 Download gff for
UFO07895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16729837..16730657 | 32..852 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:52 Download gff for
UFO07895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16722937..16723757 | 32..852 | 100 | <- | Minus |
