UFO07902.5prime Sequence
1127 bp (1002 high quality bases) assembled on 2011-07-17
> UFO07902.5prime
CAGTCGACATGCGCTATAATCTGTTAGCCAGTTCGTTAAAATTGCTGAAT
AGCACGAAAACCCACAATTTGTTCTTGGTGAACGTGCGCAGCTTGACCGG
CGCCGCCCACACCAACGATGCAGTGGCTCCGACCACGCGCCCACCGCCCG
CAGAATCGAGGAATCCCGGAGAGGAGCAACGATCACTGCACATCGCGGTA
ATTGGAGTGCCCAATGTGGGAAAGAGCACGTTCATCAACAACACGGTGAA
CCACCGAGTGTGTCCCACCTCGGCCAAGGTGCACACCACTCGGCAGTCGA
ACACGGCCATTTACACCACCGGCCAGACGCAGTTGGTCTTTTACGATACG
CCGGGCCTGGTCACGCAACATGAGATTCGTCGGCACCACCTGGACCAGAA
CTTTAAGAGTGCCTACCGCCATGCCATACAGCATGCGGACATCATCGCCG
TGGTGCACGATGCCTCAAATGCCTGGACTAGGAAGGAACTGCATCCCACT
GTCTTGGATACGCTGAAGGCGTATAGCAACCTGCCCAGTTTCCTGGTGCT
GAATAAGATAGACGCCCTGAAGTCGAAGCGTTTGCTGTTGGATCTGATCA
AGACACTCACCAACGACACCTTGACAGTTGGCAAGCGGGAAGTCCAGGCA
AAAAGTGCTCTCGCCAAGGAAATAAGAATCAACAAGCGGGAGTCTAGCTG
GAGCCATTTTAGCGACGTGTTTCTTGTTTCCGCCTTGACCGGCAATGGGC
TGCAGGAGATGCAGAACTACCTGGTGGGCCAGGCTAAGCCCAGGGATTGG
AAATACCCAGCTGACATTCATACGGACTCCAGCCCAGAAGCATTAATTGT
GGAGAGTGTGCGGGCTCGTCTGCTGGACTACTTGCCGCAGGAGATACCCT
ACACCTTAAGTGCGAGATCGAGTACTACAGTGTTGGAAAAAAATGTTGTT
CTAACACATCCGGTGCAGGTCCAGTGCCCCCACCACGCGAATCGAGCGCC
TAATCTTGTGGCGAGGGTAATGGCAAGCTGCGCAGAATCACGGACGGAGT
TACATCAGACTGGTGGAATGTCGCAGCATGTCCCTTAACTAATCTACGTC
AAGGCAGAGACCGCGCTGCAGCTTCAA
UFO07902.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:31:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7488-RA | 1249 | CG7488-RA | 72..1126 | 9..1067 | 5015 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:31:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12995691..12996624 | 9..941 | 4590 | 99.7 | Plus |
| 3R | 32079331 | 3R | 12996699..12996794 | 963..1060 | 285 | 90.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:31:55 has no hits.
UFO07902.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:50 Download gff for
UFO07902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7488-RA | 38..1109 | 1..1077 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:25 Download gff for
UFO07902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7488-RA | 65..1136 | 1..1077 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:40 Download gff for
UFO07902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7488-RA | 65..1136 | 1..1077 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:40 Download gff for
UFO07902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12995684..12996624 | 1..942 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:25 Download gff for
UFO07902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8821406..8822346 | 1..942 | 99 | -> | Plus |
