UFO07903.5prime Sequence
1119 bp (1011 high quality bases) assembled on 2011-07-17
> UFO07903.5prime
CAGTCGACATGCTGTCCAGCGAGATAGCCACTCTCGAGTGTGTGCATCAT
CCGAATATACTGAGGCTTTTCGAGGTGGTCGAAACTCTGGGCCGCGTTTA
CCTGGTCACTGAGTGGATTCGCGGTGGCGAGCTATACAACCACATCACCC
AAGGCGGTCCGCTGCGGGAGATTCATGCGGCCCCGTTGCTGAAACAACTC
CTCCTGGCAGTCAAACATATGCACAGTCTGGGCTACGTGCATCGGGACAT
AAAGGCGGAAAATGTCCTGCTCCTCTCCGAGGATCGCCTCAAGCTGGCCG
ACTTCGGTTTCAGTACCCAACTCATCAATGGTGCCAATCAAAAGCTCGAC
ACGTTCTGCGGATCCCCTCCGTATGCGGCGCCCGAGCTCTTCTCCGATGA
CCACTACATAGGGGCGCCCGTGGATGTTTGGGCCCTGGGCATCCTGCTCT
ACTTCATGGTGGTCGGAAACATGCCCTTCCGGGCACCAACGATTCCCGGC
CTGAAAGCAGCCATCCTGAAGGGTGACTATCTGCTGCCCGGCCAGCTCAG
CTTGCCCTGCATAAGACTTATACAACGCATCTTGATTCATATACCCGCCC
AGCGGCCAACCATCGACGACATGCTGAACAGCCAGTTCGTGACCTGTCCC
AAGCTCAGTGCCGATCTGATGCAGTGGGAGATCAACCAGCACACCAAGCC
GGTCAAGAGGTCCATCTTCTGGGTGCGCAGCAAGTCGCATCGGCTGCGGA
AGTCCGCCTCACTACGGGATCGATACGCGGAGGTGGTCAAGAAGCCGGCC
ATTAGCATGAACACCAGGCAGCAGGACGAGATGTTTGTGCAGAACTTCCT
GCAACCGATCGAGATGGGACACGAACTGTTGGTCCCGGTGTCAAGTCAGC
TGAAGGAGCCACAGTCCACCGAGCAGCGAAGCGTCCACCAGAAGGTACAT
GTTCTGCGCAGCCTGAGAGAGTCACGCCCATGGAAACGGACGAGAAGCAG
CTGGCAACGGTGACAGTCATCGTCGCAGATCATCGTGAATGTGGGAGGTA
CGAGATGCCCTGTCAGAACTACGAACCGAACGCACTGCGTCATGCTGCCC
TGAACAGATCTGACAGCTA
UFO07903.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:31:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4629-RF | 2910 | CG4629-RF | 757..1779 | 9..1019 | 4835 | 98.8 | Plus |
| CG4629-RE | 3115 | CG4629-RE | 805..1827 | 9..1019 | 4835 | 98.8 | Plus |
| Atg4a-RB | 4075 | CG4428-RB | 3074..3531 | 1019..574 | 2010 | 97.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:31:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1084413..1084836 | 990..574 | 1845 | 97.9 | Minus |
| 2L | 23513712 | 2L | 1084894..1085137 | 573..330 | 1220 | 100 | Minus |
| 2L | 23513712 | 2L | 1085524..1085682 | 221..63 | 795 | 100 | Minus |
| 2L | 23513712 | 2L | 1085199..1085310 | 332..221 | 560 | 100 | Minus |
| 2L | 23513712 | 2L | 1085743..1085799 | 65..9 | 285 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:31:58 has no hits.
UFO07903.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:51 Download gff for
UFO07903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4629-RC | 799..1795 | 1..990 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:27 Download gff for
UFO07903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4629-RE | 797..1793 | 1..990 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:42 Download gff for
UFO07903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4629-RE | 797..1793 | 1..990 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:42 Download gff for
UFO07903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1084413..1084836 | 574..990 | 98 | <- | Minus |
| 2L | 1084894..1085136 | 331..573 | 100 | <- | Minus |
| 2L | 1085201..1085309 | 222..330 | 100 | <- | Minus |
| 2L | 1085524..1085680 | 65..221 | 100 | <- | Minus |
| 2L | 1085744..1085805 | 1..64 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:27 Download gff for
UFO07903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1085744..1085805 | 1..64 | 95 | | Minus |
| arm_2L | 1084413..1084836 | 574..990 | 98 | <- | Minus |
| arm_2L | 1084894..1085136 | 331..573 | 100 | <- | Minus |
| arm_2L | 1085201..1085309 | 222..330 | 100 | <- | Minus |
| arm_2L | 1085524..1085680 | 65..221 | 100 | <- | Minus |
