UFO07906.5prime Sequence
1184 bp (1047 high quality bases) assembled on 2011-07-17
> UFO07906.5prime
CAGTCGACATGCTGCGAAGTGCACTGCATTTAGCTGCCCTAGGAGTGCGC
CAGACGCGAGTGTCGAGCTCCTCACCGAAATTACCTCTAATCCTGCAAAA
TAATCTAGAAAACACGAAATATCTACAAGTGGCGCGCGATTATGCAAAGG
GCAAGGACAAAAAGAAGGAAAAAGGCGGCAAGGGAAAGCCGGGCAAGGTG
GAAATCAATGAGCAGCAGCTGCGCGAGATCCTCAATTTCGATGGCCTGAA
TAGCCAGATGCAGAAGTCCGTGATGCAGATGAAGGAGGATTTTGTGAAGC
ACCTGTCGCTGCGATCCACCAGCGGTGCCATCGACACACTGCGCATCAAA
GTCGATGGCCAGGAGCACGAGCTGCAGGAACTGGCCCAAATCTCTCGCAA
GAATCCCAAGACCATCATAGTCAACATGATTGGCTTCCCGCAAACGATTC
CCGATGTCCTCAAAGCCATCGAAAAGAGTGGCATGAACCTTAATCCCCAA
CAGGATGGCACTACACTGTTCATACCCATCCCAAAGGTCACCAAGGAGCA
CAGGGAAAATCTATCCAAGAATGCCAAAGCTCTGTTCGTCAAATATCGCG
ATGCCATACGAGGCGTTCAGAACGAACACATTCGCAAGCTGAAAAACAAC
CGGAACTTGGCAAGGATGATGCCTTCGCCGCACAGGCTCAGGTCACTGCC
ATCGCGGATCGCTTCATCTCGGAGGCGGACAAGTTGCTGGCCAGCAAGCA
GAAGGAGCTGCTGGGCGATGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGGAGCTCGATTT
CAAATTACGCCCCCGCCCTGCCACCTCATCGCAGTACTGTTGTAATTCAT
AAGCATTCTGCCGACATGGAAGCCATCACAAACGGGCATGATGACCTGAA
TCGCCAGCGGCAATCAAGCACCTTGTCGCTGGCATAATATTTGCCATGGG
GTGAAACCGGGGGCCGAGAAGATGTGTTCCCCAC
UFO07906.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:32:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4447-RA | 891 | CG4447-RA | 68..829 | 9..769 | 3785 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:32:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9364417..9365178 | 9..769 | 3760 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:32:04 has no hits.
UFO07906.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:52 Download gff for
UFO07906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4447-RA | 59..825 | 9..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:32 Download gff for
UFO07906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4447-RA | 68..834 | 9..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:46 Download gff for
UFO07906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4447-RA | 68..834 | 9..775 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:46 Download gff for
UFO07906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9364417..9365183 | 9..775 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:32 Download gff for
UFO07906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9357517..9358283 | 9..775 | 99 | == | Plus |
