UFO07909.5prime Sequence
954 bp (827 high quality bases) assembled on 2011-07-17
> UFO07909.5prime
CAGTCGACATGATTCGAAAGGTGCCGCTAATTGTAGTCCTGGGCTCCACG
GGCACCGGAAAGACGAAACTGTCTTTGCAACTGGCCGAACGCTTCGGAGG
AGAAATAATCAGCGCTGACTCCATGCAGGTTTACACCCACCTGGACATCG
CCACCGCCAAGGCAACCAAGGAGGAGCAGTCCCGGGCACGACATCATCTA
CTGGACGTGGCCACACCGGCCGAACCCTTCACAGTCACTCACTTTCGTAA
CGCAGCACTGCCCATTGTGGAGCGCCTGCTCGCCAAGGACACTTCTCCGA
TTGTGGTGGGCGGCACGAATTACTACATAGAATCCCTACTTTGGGATATT
CTGGTTGACTCGGATGTCAAGCCGGACGAAGGCAAACATTCGGGGGAGCA
TCTTAAGGATGCCGAACTGAATGCTTTGTCCACCCTCGAGCTGCATCAGC
ACCTTGCCAAGATCGACGCAGGTAGTGCCAACCGTATTCACCCCAACAAC
CGGCGCAAGATCATCCGGGCTATCGAAGTGTATCAGAGCACCGGGCAGAC
TTTGAGCCAGATGCTGGCGGAACAGCGGGCACAGCCGGGAGGAAACCGCC
TGGGTGGACCCCTTCGCTATCCACACATCGTTCTCCTTTGGTTGCGTTGC
CAGCAGGATGTTCTAAACGAGCGATTGGATTCCCGCGTAGATGGCATGCT
GGCCCAGGGCTGCTCCCTGAACTACTACAGTTTCACATGCCCACCATGCT
ACCACTGTGCAGCCTATACGTCGGAGTTCTGCAGACGATTGGCTACAAGG
ATTTATTCCCTATCTGATTCAGTACGACAGCAGCAGGACGAAAGATAGAG
AGTACCTCAAACCCATAGTTACAGCTGCAAGCTCCAAAAACTGAAGAAGA
AGGTCTTCAATTGCTTGGAACTCTACCCATTTGTGCGAAAACTATGTTTA
TCCC
UFO07909.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:32:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31381-RB | 1680 | CG31381-RB | 198..1158 | 2..944 | 4200 | 97 | Plus |
| CG31381-RA | 1699 | CG31381-RA | 217..1177 | 2..944 | 4200 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:32:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24877345..24878225 | 2..873 | 3880 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:32:11 has no hits.
UFO07909.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:53 Download gff for
UFO07909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31381-RA | 193..1137 | 1..929 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:36 Download gff for
UFO07909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31381-RB | 197..1141 | 1..929 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:49 Download gff for
UFO07909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31381-RA | 216..1160 | 1..929 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:49 Download gff for
UFO07909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24877344..24878288 | 1..929 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:36 Download gff for
UFO07909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20703066..20704010 | 1..929 | 97 | | Plus |
