UFO07918.5prime Sequence
1157 bp (1031 high quality bases) assembled on 2011-07-17
> UFO07918.5prime
CAGTCGACATGGCTTTCCTATGTGCACCGGGTCTCACCTTCTTCCTCACC
TACTCGATTTTCTCGGCGGTGCTGGGCATGCTGCAATTCGGCTACAACAC
CGGCGTCATCAACGCGCCCGAAAAGAATATCGAGAACTTCATGAAGGACG
TCTACAAGGACCGCTACGGCGAGGACATCAGCGAGGAGTTCATCCAGCAG
CTCTACTCGGTGGCGGTATCCATTTTCGCCATCGGCGGCATGCTGGGCGG
TTTCAGCGGAGGCTGGATGGCCAACCGCTTTGGCAGAAAAGGCGGCCTAC
TGTTGAACAATGTGCTCGGAATTGCCGGCGCCTGTTTGATGGGATTTACC
AAAGTTAGTCATTCCTATGAAATGTTATTCCTTGGCCGATTTATAATTGG
TGTTAATTGCGGCCTCAACACTTCGCTGGTGCCCATGTACATCTCGGAGA
TAGCGCCACTGAATCTGCGCGGTGGCTTAGGAACTGTTAATCAATTGGCT
GTGACTGTAGGTTTACTATTATCCCAAGTGCTGGGCATCGAGCAAATCCT
CGGCACCAACGAGGGCTGGCCCATCCTCCTGGGCCTGGCCATCTGCCCGG
CGATCCTGCAGCTGATCCTGCTGCCCGTCTGCCCGGAATCGCCCAGATAT
CTGCTCATTACCAAGCAGTGGGAGGAGGAGGCGCGAAAAGCCCTGCGCCG
ACTGCGAGCCTCTGGGTCCGTGGAGGAGGACATCGAGGAGATGCGGGCCG
AGGAGCGCGCCCAGCAGTCCGAGAGCCACATATCGACCATGGAGCTGATA
TGCTCGCCCACCCTGCGCCCTCCGCTGATCATCGGCATCGTGATGCAGCT
GAGCCAGCAATTCAGCGGCATCAACGCCGTCTTCTACTATTCCACGTCGC
TGTTCATGAGCTCGGGATTGACTGAGAGAGCGCCAAGTTCGCTACGATAG
GCATCGGCGCCATATGGTTGTTTTGACGCCTCGTGGTCCATTCCGCTAAT
GGATCGCACGGGGTCGCCCGGACCCTGCAATCTCCTATGGTCTTGGGGCG
AATGTTCATCCTTCCTCAATCCTTCATCACCATTCGGTTCCTGGATCAAA
GGAAGTTCTTTTGTTATGTGGCAGAAATGTATTCGCACTGGAGTGTCCTA
ACTCTCT
UFO07918.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:32:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut1-RE | 2188 | CG43946-RE | 577..1714 | 5..1157 | 5135 | 97.5 | Plus |
| Glut1-RZ | 7304 | CG43946-RZ | 577..1662 | 5..1099 | 5070 | 98.3 | Plus |
| Glut1-RY | 7646 | CG43946-RY | 577..1662 | 5..1099 | 5070 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:32:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 981486..981765 | 411..690 | 1400 | 100 | Plus |
| 3L | 28110227 | 3L | 981824..982100 | 689..964 | 1335 | 99.6 | Plus |
| 3L | 28110227 | 3L | 980950..981207 | 29..286 | 1290 | 100 | Plus |
| 3L | 28110227 | 3L | 981292..981421 | 283..412 | 650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:32:38 has no hits.
UFO07918.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:02 Download gff for
UFO07918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut1-RD | 572..1664 | 1..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:53 Download gff for
UFO07918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut1-RE | 574..1692 | 1..1132 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:04 Download gff for
UFO07918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut1-RE | 574..1692 | 1..1132 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:04 Download gff for
UFO07918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 981296..981420 | 287..411 | 100 | -> | Plus |
| 3L | 980951..981207 | 30..286 | 100 | -> | Plus |
| 3L | 981487..981765 | 412..690 | 100 | -> | Plus |
| 3L | 981826..982103 | 691..966 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:53 Download gff for
UFO07918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 980951..981207 | 30..286 | 100 | -> | Plus |
| arm_3L | 981296..981420 | 287..411 | 100 | -> | Plus |
| arm_3L | 981487..981765 | 412..690 | 100 | -> | Plus |
| arm_3L | 981826..982103 | 691..966 | 99 | -> | Plus |
