UFO07924.5prime Sequence
1098 bp (994 high quality bases) assembled on 2011-07-17
> UFO07924.5prime
CAGTCGACATGGCACACCTGCGGGAGACCTCGGACAAGGCGCTGAAGCTG
TTGCGTACTTTACCGCGCGTTCAAATCGGCAATCTGCGACCAAATCCAAA
CTCAAAACAGAATGACAAGCGCGGCAGGGCACAACACGGAGGAGATAAGC
ACGGAGCGGGCAACAAGGGATCCGGTCAGCGGCAGAACTTCATGCGATTG
GGCTATGAAACGGGCAATCAGCCCTTCTACTTGAGATTTCCCTACGAGCC
CTACTACAAGGGACACCACCTAAAGCGCCAGTATCCGCCCATTTCGCTGC
TCCAACTGCAAGTGCTCATCGACACGAACCGCATAGACATCAGCCAGCCC
ATCGACATCAGCACGCTGTGTAACTCTGGCCTCCTGAAACTGAAACCCGC
TGAAATGGAGTACGGTTTCCAGCTGACGGACGATGGGCTGGACAATTTCC
AGGCTAAGATCAACATTGAGGTGCAGCACGCCAGCGAGGCGGTCATAGCG
GCCATAGAGAAGAACGGCGGTGTAATCCGTACGGCCTATTACGATCCACG
CAGCCTTCACATGCTGGCCAATCCGAAGAAGTGGTTCGAAAAGGGAGTAC
CTATTCCTAGCCGCATGCTGCCGCCCCAGGATGCAGTGGACTACTATACG
GATCCCAAGAATCGCGGCTACCTGGCCAATCCCGAGGCGATCAGCCAGGA
CCGCCTAGTTCTGGCCCAGAAGTACGGCTATCAGCTGCCCAAAATTGAGG
AAGATTCCGCGTACGAGATGCTCACCACAGCGAAAGGATCCAAGGCAAGT
ATTCTACGGCCTGCAACCCGGCTGGCTGATCAACATAGTGGACAAAACGA
TCATTAAGCGCAAGCAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATATCATATCACACTAG
CCTAGAGATCCTGGTCATGACTAGTGCTGATCTCACATAAAAAAACGCCG
GCGCACGACGTCTGAACAATCAGATGAGTCTGAGTCATACTGATCTATCA
CAGAGTTCAGCGAGCTCGATATCCAATTACGCCTGCCTGCAATCACTG
UFO07924.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:32:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL15-RA | 1029 | CG5219-RA | 120..977 | 9..867 | 4255 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:32:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20435162..20435914 | 867..114 | 3705 | 99.7 | Minus |
| 3L | 28110227 | 3L | 20435985..20436090 | 114..9 | 530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:32:21 has no hits.
UFO07924.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:55 Download gff for
UFO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL15-RA | 75..944 | 1..875 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:43 Download gff for
UFO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL15-RA | 113..982 | 1..875 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:56 Download gff for
UFO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL15-RA | 113..982 | 1..875 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:56 Download gff for
UFO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20435986..20436097 | 1..113 | 96 | | Minus |
| 3L | 20435157..20435914 | 114..875 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:43 Download gff for
UFO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20428257..20429014 | 114..875 | 99 | <- | Minus |
| arm_3L | 20429086..20429197 | 1..113 | 96 | | Minus |
