UFO07932.5prime Sequence
1123 bp (1014 high quality bases) assembled on 2011-07-17
> UFO07932.5prime
CAGTCGACATGAACACGTTAAAATACATTGATAATAAAGAAATAATAATT
GAGATTCTTCATTTGGCTATAGATTACCTGATTGGAAATTTTACTGACGA
ACAAACTCTTCGTTCGTCACACAAGTATGGATTTCAAAATTCAGACGACT
TTCTGTTGGTCATACGAATCGTGTCAAAGTTTTACAAGGATATTTTAGTA
AAATGCGAAAAACTAACTCAATTTTCGTGTATTAACCCTGAAATGAGCCG
GCATGCACATCTTGTGCTATCAGCACGCTATTCTGAGTTAAGAAGCCATC
TCGAGCATTGGGAGTTCTTGGAAAAAAAGAATGTCATAGAATCTTTTGGA
TGGGACACACGGCTAATATTAGGAGATAGCAGCTTTGGAAGGCATATACA
TCAACTAACAACTTTGGTTTTCCAATACCGTCACATGCATATTCAAAAAG
ACTTGCATTTTGAAATGAATAACGTAATGTTAAGCGACTTCATTTATTTA
TTAGAAAATTTATTAGCCAGGGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCA
ATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAG
TTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATA
TCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATT
AAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAA
TCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATG
GTGAAACGGGGGCGAGAGTTGTCCATATTGCCACGTTTAAATCAAACTGG
TGAAACTCCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCATAAAC
CCTTTAGAAATAGGCAGCTTCACCGTACACGCCCACATCTGGCGAATATA
TTGTGGTAGACTGCGATCGTCTGGAATTCACTCCGAGCGATGAAACGGTT
CAGTTGGCTCTATGACCGGTTAC
UFO07932.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:33:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40439-RA | 707 | CG40439-RA | 59..571 | 9..521 | 2565 | 100 | Plus |
| CG40439-RB | 688 | CG40439-RB | 59..552 | 9..521 | 2270 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:33:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 854966..855435 | 52..521 | 2350 | 100 | Plus |
| 2L | 23513712 | 2L | 22797655..22798124 | 521..52 | 2350 | 100 | Minus |
| 2R | 25286936 | 2R | 854872..854916 | 9..53 | 225 | 100 | Plus |
| 2L | 23513712 | 2L | 22798174..22798218 | 53..9 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:33:19 has no hits.
UFO07932.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:09 Download gff for
UFO07932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40439-RA | 18..533 | 9..525 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:18 Download gff for
UFO07932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40439-RA | 59..574 | 9..525 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:26 Download gff for
UFO07932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40439-RA | 59..574 | 9..525 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:26 Download gff for
UFO07932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22797655..22798122 | 54..521 | 100 | <- | Minus |
| 2L | 22798174..22798218 | 9..53 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:18 Download gff for
UFO07932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22690387..22690854 | 54..521 | 100 | <- | Minus |
| arm_2L | 22690906..22690950 | 9..53 | 100 | | Minus |
