UFO07937.5prime Sequence
1136 bp (1040 high quality bases) assembled on 2011-07-17
> UFO07937.5prime
CAGTCGACATGGCGGCGGAAAAGTGTGCAGAAGAGTTTGGGGACTCCTCC
GCGGCGTCCTTGAAAATTGTACCAAAGGACTATGCATATCCACTTCTAGA
GGATCCGCAAGGCGCGCTGACCACGCCCACTGAAGGCGGGCGGACGCTAG
TTACCCGCGGTGGCTTTAACTACTTCCACTACGGATGCGATGGCCACCAG
GATGCTGGCTGGGGTTGTGGCTACCGCACCCTGCAATCGGCCATTTCCTG
GATCCAACGTCGACAGGGGTCGAGCGGTCATGTTCCTTCCATCCGGGAGA
TTCAGCAGATCCTGGTGGCCATCGGCGACAAGGGTCCAGAGTTCGTGGGC
TCGCGCGACTGGATCGGAACGCTCGAGGAGTTCTACGTGATCGATGTGCT
GCACCAGGTGCCGTGCAAGATTCTTCACGCCAAGGAGCTTAGCTCGGACG
AGATCCTCGGCGAGCTTCGGAGCTATTTTGAGAAGTACCAAGGCTTCGTC
GCCATGGGCGGTCTGAGTGACACCGCCTCCAAGGCTATTACCGGCTACCA
TTGCAGTGCACGCGGTCGCATCTTCCTGCAGGTGGTGGATCCGCATTTCG
TAGGCGTGCCCAGCTCCCGGCAGCACTTAATCGATCTGGGCTACGTTCGT
TGGGTGCCCGTTGACGAGTTCGCCGGCAGCACGTACAACCTCTGCCTCAT
CTTGCAGCCGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGG
TAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCT
AGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGC
CCGGCGGCAACCGAGCGTTCTGAACAATCCAGATGGAGTTCTGAGGTCAT
TACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCC
CCGCCCTGCCACCTCATCGCAGTACTGTTGTAATTCATTAAGGCATTCTG
CCGACATTGGAAGCCATCCACAACGGCATGATGGACCCTGATCGCGCCAA
CGGCATCAGCCACCTGTCGCCTGGCGTATATATATTGCCATGGGTGAAAA
CGGGGGCGAAGAAGTGGTCCAATTGGGCCGGTTTTA
UFO07937.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:33:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30157-RB | 927 | CG30157-RB | 158..859 | 9..710 | 3510 | 100 | Plus |
| CG30157-RA | 1034 | CG30157-RA | 265..966 | 9..710 | 3510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:33:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6974290..6974869 | 588..9 | 2900 | 100 | Minus |
| 2R | 25286936 | 2R | 6974106..6974229 | 710..587 | 620 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:33:33 has no hits.
UFO07937.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:12 Download gff for
UFO07937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30157-RA | 261..966 | 4..710 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:28 Download gff for
UFO07937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30157-RA | 261..966 | 4..710 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:33 Download gff for
UFO07937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30157-RA | 261..966 | 4..710 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:33 Download gff for
UFO07937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6974106..6974228 | 588..710 | 100 | <- | Minus |
| 2R | 6974291..6974873 | 4..587 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:28 Download gff for
UFO07937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2861611..2861733 | 588..710 | 100 | <- | Minus |
| arm_2R | 2861796..2862378 | 4..587 | 99 | | Minus |
