UFO07945.5prime Sequence
1142 bp (1021 high quality bases) assembled on 2011-07-17
> UFO07945.5prime
CAGTCGACATGTCCCACAAGAGATTCTACGTAAAGTTAGATCTGCAGCTC
CATGCGCTCACTTGTCCCGGTGTTTGGCTTTGTTCACACGGATATTTGGA
GGCCACCATCAAGACCTTGGGCTACTACTTTCGAACTGGACCCATGGAGC
CTCGCTTTCCGATGCTGTGCCACGATCAGTTCACGATGGAGGGATACTTC
AAGAGCGTGGGCTGCCTGGAGGAGATGCACGAGCTACTGAAAGCTGAACA
GCTGGAGATAACCGTCTGGCAGAATGGCCGAAGGTTGGCCTACTTCGTGG
GCAGTCTTTCGGATGTGATGCAACCCACTTTTCCGCGCCTGAGCTGTGCC
CACAGCTCCAATGTTCAGCTGTTGATGAAGGCGACGCCTGCTTTTCCGGG
TATCCTGGCGCCCAAGGTGGAGCTATCTGCGCAGTTGACCACGCAGGATC
GGAAAAAGGTGTGCAGCTGCTCCAGTTCCAGGGAGTACTCTGCTCCTCCT
GTCAATCGCCACGTTGAGAGCCGTTGCCTGGGCCATTTGGATCAGCCTCG
AAAGCAGCAAACCGTGTGTCATGGGAGGCAATCCAATTGTTGTCCAAGTG
GCAGTTACGCCGCTTGGAGAGCTGGCTCTCCTGCCCAACAGAAACAGCAG
GAACGGCGATTGTCCTCCTGCTCCAGCACAACGCAATTAAGTAGCCTTAG
CCAGAGTTCCTCGCTGACGCAGTGCAGCCACTTGTCCAGCTGTAGTTCTC
CTTTGGATGAGCATCACAACAGCTGCGATATATGCCAGGCCTACAGGCGC
ATGTTTCCTTCTTACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACACTA
GCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAA
ACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTTGA
GGTCATTACTGGATTTTATCAACAGGAGTCCAGGGAGCCTCGATTATCAA
TTACGCCCCCGCCTGCCCTCATCGCGCAGTTAATTGTGTTGTAATTCATT
AGGCAATTCTGCGAACTGGAAGCCAATCCCAAACCGCATGTA
UFO07945.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:33:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14079-RA | 1008 | CG14079-RA | 165..971 | 9..815 | 4035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:33:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19098268..19099027 | 56..815 | 3800 | 100 | Plus |
| 3L | 28110227 | 3L | 19098163..19098210 | 9..56 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:33:56 has no hits.
UFO07945.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:16 Download gff for
UFO07945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14079-RA | 159..975 | 1..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:41 Download gff for
UFO07945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14079-RA | 159..975 | 1..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:44 Download gff for
UFO07945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14079-RA | 159..975 | 1..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:44 Download gff for
UFO07945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19098157..19098210 | 1..56 | 94 | -> | Plus |
| 3L | 19098269..19099031 | 57..819 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:41 Download gff for
UFO07945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19091257..19091310 | 1..56 | 94 | -> | Plus |
| arm_3L | 19091369..19092131 | 57..819 | 99 | == | Plus |
