UFO07950.5prime Sequence
1128 bp (1000 high quality bases) assembled on 2011-07-17
> UFO07950.5prime
CAGTCGACATGTCTAAGAATCCACTTCGATTGTTCATAAAACCTGTAATT
CTTCGCCGCCTGTCTGATAAGCCCAAGTTGAGCAACAAGCCATCGAACAC
CCCTCGCCCACCAAAGGATCCACCGGATGAGGGCTACCAACCGACCAGTG
TCGATCACAATGGGATCGATGTGCCGCCGTTTGTGAGACCCTCTTCCTTC
CGCCAGTTCAGTGGACCGGATGAGAAGCTGGGACCAGGAGCAGGCAAAGC
GCTGCCCTACAAGAACCCAACTTACTTTGGCTATCATCGATTCTCATTTA
TGGAACTCACGGTCACGGCTGTGGAGTTACGAGACGAACGTCGATTGGAC
GGAGGACTACAGGCATCCATCGAAGCCGACGAAGAATCCGAGTGTGGCGA
GGCCCAACTGGAGACCATGAAGAAGCTGGAAAGCGAGTGCGATGCGATAC
TCTCCAACCAAGCCAAGAAAATCCAGAAGGCCAAATCTTCGGCCGAGGAG
AAGTGTCTCCAGGAGATGAGTGAGGAGGAGCTAAAGGAGTGGTGCAAGAA
AAAGGAGGAGGACATCAAAAAGAAGGAGCAGGAAAAGAAGGAGGCCAAGT
CCTCGCCCAAGGAGAAGAAAATCCAGGACATGAGCGAGGAGGAACTGAAG
GCTTGGTGCCAGAAAAAGGAAGAGGACATCAAAAAGAAGGAGCAGGAAAA
GAAGGAGGCCAAGTCCTCGCCCAAAGAGAAGAAAGTCCAGGACATGAGCG
AGGATGAACTGAAAGCTTGGTGCCAAAAGAAGGAAGAAGACATCAAAAAG
AAGAGCAACAAAAGAAGGAGGAAGGAAAGTGTGAAGGCGATGACAACAAA
AAGGATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATATCATAATCATAATCATAATCATAATCACAACTAGCCTAGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
CAACGAGCGTTCTGAACAAATTCCGAATGGGAGTTCTGAGTCATTACTGG
ATCTTTTCAACAGGAGTCAGCGAGCTCGATTCCAATTACGCCCCGCCTGC
CACTCATCGCAGTACTGGTGTATCATAG
UFO07950.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11815-RA | 1010 | CG11815-RA | 71..919 | 9..856 | 4205 | 99.8 | Plus |
| CG11815-RA | 1010 | CG11815-RA | 654..884 | 478..708 | 795 | 89.6 | Plus |
| CG11815-RA | 1010 | CG11815-RA | 540..770 | 592..821 | 755 | 88.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1970282..1971130 | 856..9 | 4180 | 99.8 | Minus |
| 3L | 28110227 | 3L | 1970317..1970547 | 708..478 | 795 | 89.6 | Minus |
| 3L | 28110227 | 3L | 1970431..1970661 | 821..592 | 730 | 88.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:34:11 has no hits.
UFO07950.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:19 Download gff for
UFO07950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11815-RA | 180..1031 | 9..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:50 Download gff for
UFO07950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11815-RA | 71..922 | 9..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:50 Download gff for
UFO07950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11815-RA | 71..922 | 9..860 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:50 Download gff for
UFO07950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1970278..1971130 | 9..860 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:50 Download gff for
UFO07950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1970278..1971130 | 9..860 | 99 | | Minus |
