UFO07951.5prime Sequence
1116 bp (1019 high quality bases) assembled on 2011-07-17
> UFO07951.5prime
CAGTCGACATGAATTTAAAGTATAAGCGGCGCTACGAGAGCTTAAAACGC
TCCGTCAAGAGTTATCTACTGGAGAACGCCGCCCTCACGGATGAGATCTG
TCGTCTGCAGGCCGAACTATCTGTGACCCGATCCCAAAGACTTTACTTGA
TAGAGCGCCTCATGTTTCACGAGGGCTTGGAGAAATCCAACAGTGGACGA
CCCAGTGTCTCGAATGGAAAAAACGACGCCGCTGAAACCACAAAGAAATA
CAGTCCTGTAGTTTCGCATAAGAACCCCGTCGAAGATAAGCCAAAAAATG
TTACAATTGTACGGAAAAAGAAGCCCATGTTTCCGATGAACCTAAATAAT
GTATTACTCCACTCACTGGGCGAGATTATATCAGTGAATCCCAATTTTCA
CACTGAGAGCTGGATATATCCCGTGGGATATGTGGCCACACGAATCTACG
CCCATCCCAAGGATCCGCGCAAGAAGTGTGTGTTCACATGTAAGATTTTA
AATAACGCCGGGATTCCTCAGTTCCAAATAATACCCGACAATGATCTGGA
TGGAGTTTTCTTCGGAGAAAGCGCCAATATGTGTCACATGGAGCTTCTTA
ACTCCATTCAGCGGTCTCCCTGCGTTAAAATTAAAATACCGTTCGACGTA
CAGGGCGAGGTTTTCTTTGGCTTGTCAAACCAAAAAACACAATCGCTGCT
TATGATGGATCCTGCCTTTCATCAGTGCACGAATTTCAAGGGATTCGCGG
TGCAGAATGTTCAGTCCTTAAACAGCGCGTCTTTATCCTTTGAGACGCTC
CAGGGATTTCTATCTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACATAAAAAAC
GCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGGAGG
TCATTACTGGAATCTAATCACAGGAGTCAGCGAGCTCGAATATTCAAATT
ACGGCCCCGCCTGCCACCTTCATCCGCAGATACTGGGTGTAATCCATAGC
ATTCTTGCCGAACTGG
UFO07951.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31111-RA | 952 | CG31111-RA | 81..887 | 9..815 | 4005 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25055141..25055885 | 815..71 | 3695 | 99.7 | Minus |
| 3R | 32079331 | 3R | 25056034..25056097 | 72..9 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:34:14 has no hits.
UFO07951.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:19 Download gff for
UFO07951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31111-RA | 76..887 | 1..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:51 Download gff for
UFO07951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31111-RA | 76..887 | 1..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:51 Download gff for
UFO07951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31111-RA | 76..887 | 1..815 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:51 Download gff for
UFO07951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25055141..25055884 | 72..815 | 99 | <- | Minus |
| 3R | 25056035..25056101 | 1..71 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:51 Download gff for
UFO07951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20880863..20881606 | 72..815 | 99 | <- | Minus |
| arm_3R | 20881757..20881823 | 1..71 | 94 | | Minus |
