UFO07952.5prime Sequence
1128 bp (999 high quality bases) assembled on 2011-07-17
> UFO07952.5prime
CAGTCGACATGGCCGATGAGGAGCTGCAAACCTACCGTCGCTGCGTTGGC
CTGCAGCTGGAGGAGCTGGAGCTGCTGAGCTCCATATACTGCGCGCCCGG
AGAGCTGCATATGCTCGATGCCGGCGTAGTGGCTGATTTCAATGAGTTTC
TCAAGGATGATAAGACAAAACCCGCTACTAGCCTTCTATCCCATTTGGAG
TATGTGGTCAAATTGACTCTACCAGGCAAACAGTGCGTGGAAGTGCGAGT
GGAACTGCCGCACCTATATCCGCTTTTGGAGCAGGCACGCGTCAGTGTAC
ACACTACGCTACTGGGAAAATCCAAGGAGCAGCGCTTAAAGAATGATTTG
GAGCAGTATCATGGTGAAAGGCGGGAGGAGGACGCCGAGCCGTACATCTT
CCAGCTGCTGAGCTGGCTGCAGGACCGCATCGAGGATCTGTTAAAACGAC
CAGCTTCCGAGTTTGAAGTGCAGCAGGTAGCATCATCAGACCCGCAACAG
CCACCAGCTACGGAACTTCAGAGAATTTGGATTTATTCGCATCACATCAA
ATCCAGTGCCAAGCGGCAGGAGCTGATTCGGCAGGCCCGACAGTTGGAGC
TCACAGGATTCAGTAGACCCGGTAAACCGGGCATCATATGCGTGGAAGGT
GATTCGGCAAATGTACAGGAATTCTGGCGCACCATCAAGGCCCTGCGCTG
GCAGAAGATCAGCGTGGTGCGGACGGAGCCTCGGCAGCGCAAGCGGGGAT
TCGAGGACTTCAGCGAACAGCTTTTTAATGCCGAAGAAGGCGTCATGAAC
ATGGGCCAGTTCATTCGATTCCTCGAAGCCCACGGATTTGGCTACATGAA
GTCGGAATTGTTTGGGTTTAGCCGCAAGCTTTCTAGACCATTCGTTTGGC
GCGCGGGCCCAGGTAGTGGTCATATCATATCATATCATATCATATCACAC
TAGCCTAGGAGATCTGGTCATGACTAGTGCTGATTCTCACCATAAAACGC
CGCGCACGAGCGTTCTGAACAATTCGGATGGAGTTCTGAGTCATACTGAT
CTATCACAGGGATTCAGCGAGCTCGGATTCAATTTAGGCCGCCTGGCACT
ACATCGCGGAGTACTGTGGTAATCCTAA
UFO07952.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30338-RA | 1039 | CG30338-RA | 117..981 | 8..873 | 4305 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9598583..9599440 | 8..865 | 4290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:34:18 has no hits.
UFO07952.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:20 Download gff for
UFO07952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30338-RA | 110..984 | 1..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:53 Download gff for
UFO07952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30338-RA | 112..986 | 1..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:53 Download gff for
UFO07952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30338-RA | 112..986 | 1..879 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:53 Download gff for
UFO07952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9598576..9599452 | 1..879 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:53 Download gff for
UFO07952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5486081..5486957 | 1..879 | 99 | == | Plus |
