UFO07953.5prime Sequence
1111 bp (1005 high quality bases) assembled on 2011-07-17
> UFO07953.5prime
CAGTCGACATGGCCCTGGAAAGTATTTGTGGTATGGATAAGCTGCCATTT
ATGAAGAGCTTTGGATATCGCACCTCGAAGCAGACAATTGAAGAAATCAG
AGTCGCATCTAGTAACATGGATAATCCCCTCGCCATAATGGCTCCGCCAT
ATGAAAATCCACGGGAAAGTGTGAAAAAACTGAATGCGCTAAGTGAAGTG
CAGATAGATTTTGACCACGGAACCACCACGGTGGGTTTTGTTTACCAAGG
TGGCATCATTTTGTGTGTGGATTCCAGAGCCACGTCGGGAAAGTTAATTG
GATCTCAGAGCATACATAAGGTCGTACAGGTCAACCAGTACATAATGGGT
ACCACTGCAGGTGGTGCAGCGGATTGCACATACTGGGATCGAGCTTTGAC
CAGGGAGTGCCGACTGCACGAGCTCCGCTATAAGGAGCGACTTCCAGTCC
AATCTGCTGCCAAATATATCTCCAACGTGGCTGCGGAATACAAGGGAATG
GGTCTCTGCATGGGAATGATGCTGGCCGGTTGGTCGCCCGAAGGACCCAG
TTTGGTATACGTGGACTCCAACGGCCTGCGGATCCATGGAAAGCTTTTCG
CCGTGGGCAGTGGAGCCCCCAATGCCCTGGGAATTTTGGACTCTGACTAC
CGGTTGGATCTCAGTGATAACGAGGCCTACGACCTGGCCTTCCTTGCAGT
ATATCATGCTACCATGACAGATATCTTTTCAGGCGGTGTGGTGAGACTAT
ATCACATGGATCAAGGAAACTGGAGGAATGTGGCCAATAAAGACTGCCAG
GAACTGCATGAACAGTACTCAGGTGTGGGAAATCAACAAACTCCCGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATATCA
TAATCATAATCATATCATATCACACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGATTCTCACCAATAAAAAACGCCCGGCGCACGGCGTTCTGAA
CAATTCCGGATGGAGTTCTGAGTCATTACTGATCTATCACAGAGTCCAGC
GAGCCTCGATATTCAATTACGCCCCGCCTGCCATCATCCAGTACTGTGAT
CATAAGCATCC
UFO07953.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta5R2-RB | 1534 | CG31742-RB | 80..918 | 7..845 | 4180 | 99.9 | Plus |
| Prosbeta5R2-RA | 1082 | CG31742-RA | 80..918 | 7..845 | 4180 | 99.9 | Plus |
| Prosbeta5R1-RA | 1107 | CG9868-RA | 564..769 | 484..689 | 190 | 75.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17990497..17991335 | 7..845 | 4180 | 99.9 | Plus |
| 2R | 25286936 | 2R | 10820618..10820663 | 486..531 | 185 | 93.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:34:21 has no hits.
UFO07953.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:21 Download gff for
UFO07953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31742-RA | 73..926 | 1..856 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:56 Download gff for
UFO07953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta5R2-RA | 73..926 | 1..856 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:54 Download gff for
UFO07953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta5R2-RA | 73..926 | 1..856 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:54 Download gff for
UFO07953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17990490..17991343 | 1..856 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:56 Download gff for
UFO07953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17990490..17991343 | 1..856 | 98 | == | Plus |
