UFO07954.5prime Sequence
1099 bp (1004 high quality bases) assembled on 2011-07-17
> UFO07954.5prime
CAGTCGACATGAAGTGGACAACGGGTCTGCTCTTGGCGGTGGCCATGCTC
AGCCTGCCATCTCGGGGAGATTCATCCCGAAATCTCACGGAATTCATGGG
ACATCGACAGAAGCGCTGGCTGATCTACCAGAATAGTGGGTCTTTGAAGT
TTAGTATTGGTCCCTCGATGCCCATACCCTTGGGGGACAAGGTGACCTTC
CGTTCCTGTGTGCTCTCCTACACGCTCCAAGGTGGTTCCTATTCCCTGCC
CACATCACCCATCTGGCCGTGGGATAAGTGGGAAGGCACCTTCGCTCGTT
CCTTGATGCAAATGCGAAGGAATATTGAGCGCCATGTGGCCAATGGCGGA
GTGCGATATGCGGACGATGCCAGGCTCTTGGTCTACACTGCACTGGAGGA
GTATATGGGCAGGAGGAACAATGACCGCTCCATGGGCAGACAATGTCTGC
TGCGCTCCATATGCGAGAATGCTCAGATCCATCATCATATCGGTGTGTTC
TCGGAAATTATGGATATTGTACTCAGGGCAAGCTTTCTAGACCATTCGTT
TGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATC
ATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTC
TCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAG
ATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGC
TCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAA
TTCATTAAGCATTCTGCCGACATGGAAAGCCATCACAAACGGCATGATGA
ACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCTTGCGTATATATTTGC
CCATGTGAAAACGGGGGCGAGAGTGTCCATATTGCCACGTTTAAATCAAA
CTGTGAACTCACCCAGGATGCTGAGACGAAAACATATTCTCAATAACCCT
TTAGGAATAGCAGTTTCCACGTAACCCGCCCAATCTTTGCAATATTGGTG
TAGAACTGCCGGAATCGTCTGCATTCATCCGAGCGAATAAAAAGGTTCG
UFO07954.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14826-RC | 1074 | CG14826-RC | 21..539 | 8..526 | 2595 | 100 | Plus |
| CG14826-RA | 1022 | CG14826-RA | 272..790 | 8..526 | 2595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7234783..7235302 | 8..527 | 2600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:34:25 has no hits.
UFO07954.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:21 Download gff for
UFO07954.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14826-RB | 272..794 | 8..531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:59 Download gff for
UFO07954.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14826-RA | 272..797 | 8..533 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:56 Download gff for
UFO07954.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14826-RA | 272..797 | 8..533 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:56 Download gff for
UFO07954.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7234783..7235302 | 8..527 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:59 Download gff for
UFO07954.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7227883..7228402 | 8..527 | 100 | == | Plus |
