Clone UFO07955 Report

Search the DGRC for UFO07955

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:79
Well:55
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG13078-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO07955.5prime Sequence

698 bp (697 high quality bases) assembled on 2011-07-17

> UFO07955.5prime
CAGTCGACATGAGCGATGACAAAACAAAACCAACCTCAGTGCTCCAGCAT
ATAGAATCGGCGCTATATGTGATCAACCAGCTGTGCATAGGATTCGTCAC
CATTTGGATCAGCTGGACCTGCTTGCGCCAGGACCTCTCGGGCATTCGCC
TGCATGCCTGGCTGGTTACCTTCGGTTTTGTGTTCCTGATGGCCGAGGGA
ATGATGTGCTTCTACGACGGCAGTTGGCTAACTGTGCGTTACTCCCGGAA
TTACAAGACTGCCTTTCACGTGGTCCTTCAGATCCTTGGGGGAGGCATGG
GCGTGGCCGGCTGTTTGATTCAACTAATACGTGACGATTGGTCAATCAGC
GTCACGTTACATGCCCGCCTGGGTTTCGCCGCCTTCGTCCTGTGTCTGAT
CTCATTGCTGAGTGGACTGGTCGCCTTCCTGGCGAGATGCCTGAGCAGGA
CCATCTCACCCTTGGTCAACAAGACCTTCCATGTGGTCCTCAGCTTCACC
GCCTTCGTGATCGCCATGATGGCGCAGTTTTACGGATACACACCGACTGG
AATTCTCAGGGGACAAGGACAAGATTTTCGTTGTCCTCATGCAGGTCGTC
ACTATGGTCCTAATGGTCCTAACCAGCATTGGCGCCATTAAGTCGCTCTA
CCAAAAATTGGTAGCCTGGCCAGTGCAAGCTTTCTAGACCATTTCGTT

UFO07955.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG13078-RA 910 CG13078-RA 90..755 9..674 3225 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19564338..19565003 9..674 3175 99.1 Plus
Blast to na_te.dros performed on 2014-11-27 00:34:28 has no hits.

UFO07955.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:22 Download gff for UFO07955.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13078-RA 83..755 1..674 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:02 Download gff for UFO07955.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13078-RA 83..755 1..674 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:58 Download gff for UFO07955.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13078-RA 83..755 1..674 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:58 Download gff for UFO07955.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19564331..19565003 1..674 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:02 Download gff for UFO07955.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19564331..19565003 1..674 98   Plus