UFO07958.5prime Sequence
1125 bp (1008 high quality bases) assembled on 2011-07-17
> UFO07958.5prime
CAGTCGACATGTTTGTGCAGTGGATTTTCCTGGCCTTCAGCGTCACCGTG
GTTTCCTCTAATTGGATTCCGGAACGAATCGTGGGAGGCGACTTGATAAC
CATTCTATCAGTTCCCTGGCAGGCTTCCATTCTTAGGCTTGGACGGTTTC
ACTGCGGTGCAGCCATCTACAGTGAAGACATCGTCATAACGGCAGCCCAC
TGCCTCACCGACCGCGAGACCGAGTTCCTCTCAGTGAGAGTCGGCTCATC
GTTCACATTCTTCGGTGGTCAGGTGGTGAGGGTATCCAGTGTTCTGTTAC
ACGAGGAATACGACCAGTCCTGGTCCAACGACATAGCCGTGATGAGGCTT
CAGTCCAAGCTCCGGCTGGGAAGTGCAGTCAGTGTCATTCCCTTGGCCGA
TACTCCCCCGGCCAGTGGATCACCTGCCACCGTTTCTGGATGGGGAGCCA
TTGGTTTTAAGAAGAATTACCCCATGTCCATACTGTCCGCTTCGGTGGAC
ATTGTGGACCAGGATCAGTGTCGTAGGTCGTACGGAAGAAAAATCACCAA
GGACATGATCTGTGCGGCCGCTCCAGGAAAGGATGCCTGCTCCGGCGATT
CGGGAGGTCCTCTGGTCTCCGGTAACAAGCTCGTTGGGATCGTGTCCTTT
GGCAAGGAGTGCGCTCATCCCGAATATCCTGGAGTCTACGCTAACGTGGC
TGAGCTGAAGCCCTGGATTTTGGGCGCTATCGAAAGAATAACTAAATCTG
AAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGT
CATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATC
CTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGC
AACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGTCATTACTGGAT
CTTATCAACAGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTG
CCACTTAATCGCCAGTACTTGTTGTTATTCATTAAGCAATCTGCCGACAA
TGGAAGCCATACCAAACGACATGATGATCCTTAATCGGCAGACGCATACA
GGCCTTGTCGCCTTGCCTTATAAAT
UFO07958.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17239-RB | 832 | CG17239-RB | 5..755 | 2..752 | 3725 | 99.7 | Plus |
| CG17239-RA | 770 | CG17239-RA | 5..755 | 2..752 | 3725 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:33:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2251587..2252337 | 752..2 | 3725 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:34:00 has no hits.
UFO07958.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:17 Download gff for
UFO07958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17239-RA | 3..761 | 1..760 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:42 Download gff for
UFO07958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17239-RA | 3..761 | 1..760 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:45 Download gff for
UFO07958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17239-RA | 3..761 | 1..760 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:45 Download gff for
UFO07958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2251581..2252337 | 1..760 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:42 Download gff for
UFO07958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2251581..2252337 | 1..760 | 99 | | Minus |
