UFO07959.5prime Sequence
1111 bp (1027 high quality bases) assembled on 2011-07-17
> UFO07959.5prime
CAGTCGACATGCTGCTCAAAGGCATTCTTCTATTAGTTTCCATTGCTCAA
ATAGCAGCAGATTTCAAATCGATTGGCATTGAACAAGCTCCCTGGCAGGC
TTCCGTTCAAATAAACGACAAACATCACTGCGGAGGAGTGATATACAGCG
AAGATATCATCCTGACCATTGCCGAGTGTGTGAGAAAGGCCAGATTGGAA
TTCATCTCGGTGCGAGTGGGGTCTGCCCAGGAAAACGCCGGTGGCACTGT
GCTGAAGGTCGAGAAGATGAGGCTGCAAGTACTTGGCCTGCGTCCCAGTG
ATGTGGCCATACTCCAGCTGAGATCGCCGCTGTACTTGGACGGCGGAATT
CGGGCCATTCCCTTGGCCACCATACCATTAGTGCCGGGAACGAATGCCTC
CGTTTCGGGTTGGGGTCAACTCTCTGCCATGAATCCTTCGTCGGAAGTTT
TACTGAGAGTCGATGTAAAAATCCAAGATCAATTGATGTGCGCGACAAAC
CTTGCTCTGAAGGGCAGACTTATGAGTGTGGGCGAGATCTGCGCAGCACC
TGCGGGAGAAATTCCCTACGCCTGTCAAGGATTCGTCGGCGGTCCTTTGG
TTGCCAATAATCGGCTGTATGGAATCCTTTCCTGGCAAAGTGCCTGCGAC
GTCCTCAATAAATCTAGTGTCTATGCCAATATCGCGATGTTCAAAGTGTG
GATTGAATCCACTGTTAAGCTAATGAATTTCTTCAGAATAGGCGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCAT
AATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATG
ACTAGTGCTTGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGACAAATCCAGATGGAGTTCTGAGTCATTACTGGATCTATCACAGAG
TCCAGCGAGCTCGATATCAAATTACGCCCGCCTGCCACTCATCGCAGTAC
TGTTGTTATTTCATTAGCATTCTGCCGACTGAGCCATCCCCAACCGCATG
ATGACTGATCGCAAGCGGCATCAGCACCTTGTGCCCTGGCTATAATATTG
GCCCTGTGACG
UFO07959.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17242-RA | 842 | CG17242-RA | 48..782 | 9..743 | 3675 | 100 | Plus |
| CG17242-RB | 1035 | CG17242-RB | 48..782 | 9..743 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2268359..2269093 | 743..9 | 3675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:34:03 has no hits.
UFO07959.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:17 Download gff for
UFO07959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17242-RA | 20..769 | 1..752 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:45 Download gff for
UFO07959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17242-RB | 20..769 | 1..752 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:46 Download gff for
UFO07959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17242-RB | 41..790 | 1..752 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:46 Download gff for
UFO07959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2268350..2269100 | 1..752 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:45 Download gff for
UFO07959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2268350..2269100 | 1..752 | 98 | | Minus |
