UFO07964.5prime Sequence
1118 bp (1006 high quality bases) assembled on 2011-07-17
> UFO07964.5prime
CAGTCGACATGAATTCCACACGGCGAGCTCGTGCCAAAATTGTGACCAAG
AAAAAGATTACTGGCCGTAAAGTGCCCAGAACAGATCCGCAGCAGCAGTT
TTACTTAAAAAACAGATTCAATGCAACTCGTCCTCGTCCAAAACAATCAA
CCGTGCCTCCTAGCCAGCGAATCTGGCGCAGGACAGTGGTCCAGACCAAG
CCGAAAATAAAAACAAAGATCCCCAGGCTATTTCGCATGGATCGGAATAC
AGGACTTCCGGTGGATTACGAGAGGACGGTCAACCAGGTGATGCAGTACG
TGAATCCCAATTTGCGCAATCCACCCAGCGCGGAAAAGGTTTTGGAGGAA
TTGCTGACGAAAATGCTTACTGAGGTCGTACGACAGGGTGGTCGGTGTTG
TCGAGAACACTCTCAATTGAGATCCTTGCTGAAGAACAGGTGCCACTGCC
ACAGGTCGAGCCAGTTCCTAAGCAAGGCAGAGAAGGCCAGGTTCGAGGCG
AACGAGAGTCTGAGCCAATTTCATAGTGCTTGCAAACGGGGACCCTGTCG
AATCCCCAGTACCAAACTTGGTCCCACGTACATGAGTAAGTTCAACTTTA
ACCAGCTGAAAATCAAGAGCTCAGCAAGCTTTCTAGACCATTCGTTTGGC
GCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAA
TCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCAC
CAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGG
AGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGA
TATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCA
TTAAGCATTCTGCCGACATGGCAGCATCACAAACGGCATGATGATCTGAT
CGCAGCGCATCAGCACTTGTCGCTTGCGTATATATTGCCCATGTGAAACG
GGGGCGAGAGTGTCAATATTGCACGTTTAATCAACTGGTGACTCACCAAG
AATGCTGAAACGAAAACTATTCTCATAACCTTTAAGAATAGGCCAGTACG
TACGCCATCTTGCAATAT
UFO07964.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15425-RA | 795 | CG15425-RA | 79..693 | 9..623 | 3075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4257650..4258173 | 9..532 | 2620 | 100 | Plus |
| 2L | 23513712 | 2L | 4258232..4258323 | 532..623 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:34:50 has no hits.
UFO07964.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:27 Download gff for
UFO07964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15425-RA | 71..696 | 2..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:15 Download gff for
UFO07964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15425-RA | 71..696 | 2..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:06 Download gff for
UFO07964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15425-RA | 71..696 | 2..627 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:06 Download gff for
UFO07964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4257642..4258173 | 2..532 | 99 | -> | Plus |
| 2L | 4258233..4258326 | 533..627 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:15 Download gff for
UFO07964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4257642..4258173 | 2..532 | 99 | -> | Plus |
| arm_2L | 4258233..4258326 | 533..627 | 97 | == | Plus |
