UFO07965.5prime Sequence
1123 bp (1031 high quality bases) assembled on 2011-07-17
> UFO07965.5prime
CAGTCGACATGATCATGTTGGAGGCCACCTTGCAGCCAGGATATGTGCCT
GTTGGCATCACGCCAATCTTGAATTGGACAGAGCCACCAAGTCTAAAGCA
TTGTGATGAGGATTATCTGATCGTTGTCCTGGCATTGTCCATTTGCACCC
AGTTCTTGCTGATGACCTATGTGGCGTTCGCAGTCATGCAACCGTGTTCC
ATGCGAAGGAAGCAGTTGATTGAGGGCCAGCAAAAGACCTTCGCTAGCTT
CATATTCCGAAGGTTACTCTTCCAGTTGGACGAGGCATTACACCCTTCGG
TCGAGGCGGTGCGGTTAGACTCCTGCTTGAGGTCTGGTGAAAAGCTAATC
CAGGCCATTCAACTGTTCCGGCGAGATGCTCTCAAGGTCCTTCAGCCAGT
GCAGAATATCTCATCCGCAATGGCCAGCGATTTGTACTATGTGCTGGACG
AGGAGGAGAATGAACTGAATTTCAACGGCTATGGGAGCTCTCATTCAAAG
GTCGAGGTCACCGAGGAACTATTGGTGTATTTGCTATATCCGGAACGAAA
AGTGTCCGAGAAGAAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAA
TTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCA
TTCTGCCGACATGGAAGCCATCACAAACGGCATGATGACCTGATCGCCAG
CGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAACG
GGGGCGAGAGTGTCCATATTGGCCACGTTTAAATCAAACTGTGAAACTCC
ACCCAGGATTGGCTGAAACGAAAAAATATTTCTCATAACCCTTAGGAAAT
AGCAAGTTCACCGTAACCGCCCCATCTTGCCAATTATGTGTAGAACCTGC
CGAATCGTCTGATACTCCAGCCG
UFO07965.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15711-RB | 2345 | CG15711-RB | 1692..2249 | 9..566 | 2790 | 100 | Plus |
| CG15711-RA | 757 | CG15711-RA | 104..661 | 9..566 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16363647..16364204 | 566..9 | 2790 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:34:54 has no hits.
UFO07965.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:27 Download gff for
UFO07965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15711-RA | 98..664 | 1..570 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:17 Download gff for
UFO07965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15711-RA | 98..664 | 1..570 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:08 Download gff for
UFO07965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15711-RA | 98..664 | 1..570 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:08 Download gff for
UFO07965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16363644..16364208 | 1..570 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:17 Download gff for
UFO07965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12251149..12251713 | 1..570 | 98 | | Minus |
