UFO07970.5prime Sequence
1118 bp (1005 high quality bases) assembled on 2011-07-17
> UFO07970.5prime
CAGTCGACATGGCTGAAAAAACACAAGACGCCATGCTGGCCGAAATGGAT
TTGATCTTTCTGGACCACATACTGCCGAGGTGCTGCAAGGACATCACCAC
CTCGCAAGCGTTCTACAAGGACTACACCGCCGACAAGCCGAAGCGAACAG
TCACCGCGTTCCGGAAGCAAACGGATCCCGCCCTGATCTCGGGCCACTAT
GCGCACAACTTGAAGGTCCAGAAGCAGGAGTTGAAGACGCGGACATGGCC
ACGATCCATGGACTGGCGCGAGGAGTACGCGCAGTTCGTCAAGCGCAACA
AGTGGTGCAACGAGGAGATCTACAAGCTCTTCTTCGTGAACCCGCCCGTC
GACTACTTCCTCATCAGGGAATATCTGCAGGACCTGCTGAAAACCACCTA
TATGTCGGACTACTCGCCCAAAGACTACCAGTCGCTCATCAGCCAGCGCG
AGCATAGGGTCCAACTCGACGGCTCGGACGGCATTGACTATCGGACGACC
TATGGCAACTATCACAATCGTATCCAGGAGGAGGATCCGTTCAAGTCGAT
CCTCATCCCAGAACCAGGATCGATTGTCAGGAGCATGGAGATAGGAGAGT
TCGCCAAGCAGATGCGCAAGCTGTTCACTAAGTACAATCTAACCACCTAC
TACGAGACCATCTGCCTTCCGGCGCTGATAAAGGCCAAGGATGGTATTAT
GCCATCGGGGCCGATCGATCGCTACACACTTCGCAAGCACGCAAGCTTTC
TAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAAT
CATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACT
AGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTC
TGACAAATCCAGATGGAGTTCTGAGTCATTACTGGATCTATCAACAGAGT
CAGCGAGCTCGATATCAAATTACGCCCCGCCTGCCACTCATCGCAGTACT
GTTGTATTCATAGCATTCTGCGAACATGCAGCCATCACAAACCGCATGAT
TGACTGATCGCAGCGCATCAGACCTTGTCGCCTGCCTATAAATATTTGCC
ATGGTAACGAGCGAAAGT
UFO07970.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14676-RA | 958 | CG14676-RA | 79..810 | 9..740 | 3660 | 100 | Plus |
| CG34287-RA | 951 | CG34287-RA | 274..360 | 242..328 | 270 | 87.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5847298..5848029 | 9..740 | 3660 | 100 | Plus |
| 3R | 32079331 | 3R | 5853605..5853691 | 242..328 | 270 | 87.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:34:40 has no hits.
UFO07970.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:24 Download gff for
UFO07970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14676-RA | 74..814 | 1..744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:08 Download gff for
UFO07970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14676-RA | 74..814 | 1..744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:01 Download gff for
UFO07970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14676-RA | 74..814 | 1..744 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:01 Download gff for
UFO07970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5847293..5848033 | 1..744 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:08 Download gff for
UFO07970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1673015..1673755 | 1..744 | 99 | == | Plus |
