UFO07972.5prime Sequence
1135 bp (1039 high quality bases) assembled on 2011-07-17
> UFO07972.5prime
CAGTCGACATGCAGTACTTCGTGATGTCGTACTACTTTATGGAGGTTTTG
TATTCAGTGGTCAACACACCACTTGTGGGCAGGGAAAGAGCGATTGTGAT
GGACGTGAACGAGTGCTTCGGTCACTTCTACACATGCTTTGATGTCCTGC
TGACCATCGGCGCCATCTTTCTCATTCTCGGCACGCGAAAGGAGGCGAGC
GGAGTGACTCTGCTGCTAATCGGAAGAGTTATCCACCGGCTGTTCTTCTC
GATATGGACCATGTTCTTTTATTTCCTCTTCAACGACAGCTTGGATGTGG
GCTCCCTGCTGCTGCTAATGGCGGCCAAAATCAATTTGAGGGATCAGATG
GACTGGTTCCAGTCGAAATATCATATTTTACTGCTGGGAGGAAGACTCTG
TCTGTCCAGTTTGTACATCATTTGGATAGACGAGGGCTTGGAGACCCTTT
TCAGCATCGTTTCATTTGGTCTTTTGGTTTTCATTTGGCTTGGCTTTCAT
TGCAAACTGTTTGCCTATCTGACGGTGATTGCCCTACTATATCACGATGT
GTTTAGCAATCATTGGAGCATGTTGTGGGGCTGGAACGATACTCTGCTGT
CGATACAATACTTCTCCCTGCTGTTCTGCAAAATTGGCGGATTCCTGATG
CTCTCGGAGCTAGGTGGAGGCAGGTGGTCGGTGGATGGATACCGGAAGAG
AAGTGGCGAGAAATGGGAGAAAAAAGGCAACTACCGGATCATTAAGACAC
AGACGTCGGCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACG
CCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTC
ATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACG
CCCCCGCCCTGCCACCTCATCGCAGTACTGTTGTAATTCATTAGGCATTC
TGCCGAACTGAGCCATCACAAACGGGCAATGACTGAACCTGAATCGCAGC
GGCATACGACCTGTCGCCTTGCTATATTGGCCAAT
UFO07972.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14070-RB | 1229 | CG14070-RB | 91..843 | 9..761 | 3765 | 100 | Plus |
| CG14070-RA | 1082 | CG14070-RA | 91..843 | 9..761 | 3765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10901261..10901695 | 443..9 | 2175 | 100 | Minus |
| 2L | 23513712 | 2L | 10900887..10901206 | 761..442 | 1600 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:34:43 has no hits.
UFO07972.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:25 Download gff for
UFO07972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14070-RA | 65..823 | 1..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:11 Download gff for
UFO07972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14070-RA | 85..843 | 1..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:03 Download gff for
UFO07972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14070-RA | 85..843 | 1..761 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:03 Download gff for
UFO07972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10900887..10901204 | 444..761 | 100 | <- | Minus |
| 2L | 10901261..10901700 | 1..443 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:11 Download gff for
UFO07972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10900887..10901204 | 444..761 | 100 | <- | Minus |
| arm_2L | 10901261..10901700 | 1..443 | 99 | | Minus |
