UFO07974.5prime Sequence
1125 bp (1002 high quality bases) assembled on 2011-07-17
> UFO07974.5prime
CAGTCGACATGAAGTTAACAACCTGTCAAATTGCTAAAGTATTTCCGCTG
TTGACAGCCTTCTTCTTCCTCAATTCTCCCAGCGCAGCCTCATTATCCTT
CGGTTTGAGTCCCACCTTCGCCTCCGCCTCCGCCTCCAGCTCCTTGTCCT
CGTCATCGTCCTCGTCCTCCCACTTTCACTCAGAAAAACCCCTCCACTCG
GATGTACTCGTCCTGCGAGCGGCCAAGCCATCCAGGGCCATTGCAACAAG
CGCAGATGCGGCTACGCGGTCTGTGCCAGCGTCAGCGGCAGAAACAACAC
TTGGCAGCAAGTCAATTTGGCCGACAGCTATACAAACAAAAAGTCCACGT
AATGCGCGTGAAGCTGGACGTCACAAACGTCAAATGCAAAAGCCCGCAAT
CCAGCAGCAACCACTGCAGCAGCAGCAACAGCGCATTAATCCCCCGCAGC
AAAAGCGACAGCAGCAGCAGCAGCAGCAGCAGCAAGTGCAACATCAGGCT
CAACGAGTGGGCGTTTTAATACCTCCTTCGCTGCACGTTGATTTGACGCA
TGTGCAACAGGGCTTTCAGAATTTCCTTGACTTTTTCCAACTGCATTTAT
TTAATGTCACCGTCGATTTTCTGCGTGATGTGGACTTAAGCGGCTTCATT
AAATTACTCGAGCTGCCCAAGTACACGAGCGTTATAAAGACTTTAAATGC
GGGCATTATGGTAGCCAGCCACGTGGACGTGGACCAAAATTCCACTATCT
ACATTGGCACGCCCAGCCAGCCACGTCAGCAACATCGGCTGCATTCAAAG
CAGAGCAGGAGCCCCATCGTCATCATCATGAGGACTCCAAAGCAAAACAG
TTTCCAGCGGGCGAGGAGGAATCCCATTCATCGGGCGAGACCGAGGAAAT
CATTGGACGACGCCGCATCTTCTCGGGTCACTGTCATCAGCTGGCGGAGC
ACTGGTCCTCGATTTCAATAGACCGTCGTCTGTGGCCTGTCCGCGATGAA
ATCTCAGCATTTCTTCGTCATCGAAGCATTCCCTAGCGTACAGCATTCCA
CCAAGTGAACTGTCGCAGTTGATATCCTATATTGGCCTGCACGTCTCGAA
CTGCACGATGAAGAACCCTCCTGGG
UFO07974.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:35:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34357-RB | 2287 | CG34357-RB | 698..1805 | 9..1092 | 4880 | 97.4 | Plus |
| CG34357-RD | 7216 | CG34357-RD | 698..1798 | 9..1086 | 4870 | 97.5 | Plus |
| CG34357-RC | 6633 | CG34357-RC | 698..1798 | 9..1086 | 4870 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:35:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4537805..4538429 | 633..9 | 3095 | 99.7 | Minus |
| 3R | 32079331 | 3R | 4534173..4534526 | 980..633 | 1455 | 98 | Minus |
Blast to na_te.dros performed 2014-11-27 00:35:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 574..599 | 169..144 | 112 | 92.3 | Minus |
UFO07974.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:32 Download gff for
UFO07974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34357-RC | 693..1724 | 1..1021 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:34 Download gff for
UFO07974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34357-RB | 693..1724 | 1..1021 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:18 Download gff for
UFO07974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34357-RB | 693..1724 | 1..1021 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:18 Download gff for
UFO07974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4534144..4534525 | 634..1007 | 96 | <- | Minus |
| 3R | 4537805..4538434 | 1..633 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:34 Download gff for
UFO07974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 359866..360247 | 634..1007 | 96 | <- | Minus |
| arm_3R | 363527..364156 | 1..633 | 99 | | Minus |
