UFO07975.5prime Sequence
1106 bp (999 high quality bases) assembled on 2011-07-17
> UFO07975.5prime
CAGTCGACATGCAGATAGCGGCAGCTATGTGGTGGTTTTACATCTCAAAG
ATACTGGAATTCGTAGACACGGCATTCTTCATCTTGCGCCACAAATGGAA
CCAGCTGAGCTTCCTACATGTGTACCACCATAGCACCATGTTCTTGTTTT
GCTGGACTTATGTCAAATGGCTGCCGACGGGTTCAACCTTTTTTCCAAGC
ATGATAAACTCTTTTGTGCACGTGATTATGTACAGCTATTATGCATTGAG
TGTGCTGGGTCCTCGAGTCCAGAGGTTCCTCTGGTGGAAGCGCTACTTAA
CTGGCCTCCAGCTGGTCCAGTTTACCATTATCTTCTTTTGGGCATCACAA
TTAGTTTTCCGGGGCTGTGAGTACGGAAAATGGTTAACGCCAATCGGAGC
TGCCTATATGGTGCCATTTCTCTTTATGTTCGGTAGGTTCTATGCTCAAA
AATACTGTGTTTCGGCAGTTGTAAAGAAAGCCAAGGCAAGCTTTCTAGAC
CATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAA
TCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGC
TTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAC
AAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCC
AAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTAC
TGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGC
ATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTAT
AATATTTGCCCATGGTGAAACGGGGGCGAAGAGTTGTCCATATTGGCCAC
GTTTAAATCAAACTGGTGAACTCACCCAGGGATTGGCTGAGACGAAAACA
TATCTCATAAACCCTTTAGGAATAGGCCAGTTTTCACCGTACACGCCACA
TCTGCGATATATGTGGTAGACTGCGAATCGTCTTGTATTCACTCCGAGCG
ATGAAACGTTTCGTGGCCATGAAACGGGGTTACAAGGGTGAACCATATCC
ATTATC
UFO07975.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:35:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elo68beta-RB | 840 | CG11801-RB | 359..830 | 14..485 | 2360 | 100 | Plus |
| Elo68alpha-RA | 937 | CG32072-RA | 355..768 | 30..443 | 935 | 82.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:35:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11100685..11100983 | 485..187 | 1495 | 100 | Minus |
| 3L | 28110227 | 3L | 11101045..11101222 | 186..9 | 890 | 100 | Minus |
| 3L | 28110227 | 3L | 11102138..11102287 | 349..200 | 570 | 92 | Minus |
| 3L | 28110227 | 3L | 11102368..11102522 | 184..30 | 385 | 83.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:35:20 has no hits.
UFO07975.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:32 Download gff for
UFO07975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elo68beta-RB | 325..810 | 1..489 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:36 Download gff for
UFO07975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elo68beta-RB | 348..833 | 1..489 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:20 Download gff for
UFO07975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elo68beta-RB | 348..833 | 1..489 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:20 Download gff for
UFO07975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11100685..11100983 | 187..485 | 100 | <- | Minus |
| 3L | 11101045..11101222 | 9..186 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:36 Download gff for
UFO07975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11093785..11094083 | 187..485 | 100 | <- | Minus |
| arm_3L | 11094145..11094322 | 9..186 | 100 | | Minus |
