UFO07978.5prime Sequence
1111 bp (1001 high quality bases) assembled on 2011-07-17
> UFO07978.5prime
CAGTCGACATGCCTCCTGTTGAAGTGAGCATACGCCAAGGAGTTGCGTTT
TTGGGCTTGTATGTGCTGCTCCTGGCTGCTTTGGTGCGTCCCCAGATGAA
CTTCAGCATATTCGTGGACTCGTTCTTCCTGCAGGTCAATCACTCGGTGG
TAATGGTGCTGAGCTACCGGTTTGATTCCTATATGGCGATGGCCGCCGCA
CCACTCAGTGCCGTTACGGTGTTTGCCCTTTCCAAGTGGAACGAACGTTG
CGAGAATCCCTCCTCCAGGAAGCTAGTGATCATGGGCGTGACATGCTTGT
ATGTCTTGGTGCTGGTGGCCAATGTCCTGGCCAATGGAATAGTGGTTCAG
CAGGCGTTGATCCGCTTCGATCAATGTCCGTATCGGGCGTGGTATATGTA
CAGCCAGATGGCCATGTCCTTTATCAAATCCTCGATTGCAGAAGTCCAGG
AAGTTTTCACCGGACGGCCTCAACGTCGGTCCCGACTTATATATCGTTTG
CATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGG
ATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCC
TGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATG
GAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCA
CCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAAACGGGGGCGAAGA
AGTGTCCATATGCCACGTTTAAATCAAACTGGTGAAACTCACCAGGATGC
TGAGACGAAAAACATATCTCAATAATCCCTTTAGGGAATAGCAGTTTTCA
CGTAACACGCACATCTGCGAATATATTGTGTAGAACTGCCGGAAATCGTC
TGCAATTCACTTCAAGCGATGAACGTTCAGGTTGTCATGGAACGGATTAC
AGGGTACCATC
UFO07978.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:35:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5388-RB | 1324 | CG5388-RB | 155..649 | 9..503 | 2475 | 100 | Plus |
| CG5388-RA | 741 | CG5388-RA | 155..649 | 9..503 | 2475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:35:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22337125..22337619 | 503..9 | 2475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:35:32 has no hits.
UFO07978.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:35 Download gff for
UFO07978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5388-RA | 147..649 | 1..503 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:43 Download gff for
UFO07978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5388-RA | 147..649 | 1..503 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:25 Download gff for
UFO07978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5388-RA | 147..649 | 1..503 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:25 Download gff for
UFO07978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22337125..22337626 | 1..503 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:43 Download gff for
UFO07978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18162847..18163348 | 1..503 | 99 | | Minus |
