UFO07979.5prime Sequence
1149 bp (1020 high quality bases) assembled on 2011-07-17
> UFO07979.5prime
CAGTCGACATGTCAGCGATCACCATACGCGCCATGACAATCGGGGATTAC
GAGGAGGTCGAGGCCTTTCTCGCAGTGCACTTCTTCAAGCAGGAGCCGCT
AATGCTGATCCCCCAGGAGGATCCCAAGCAGAGCGAGGTGTCTTCCGCGG
AGGCTGAGCTACACCGCTCGCTCATACCCCAGGATCTCTCCCTGGTGGCC
GTCGACGGGGAGCGCATTGTGGGCGTGGTTCTGGCCGGTGAATTGGTACC
CGAGGATCTGGAGAGGGAGTACCAGGAGGCTGAGCAGAAGGAGATCACGT
GCCTGCTGGACAAGATACACAAGTTTCTGGCCGGGATCGAGCGGCAGGCC
AATATCTTCAAGCACTACGGAGTGGAGCGGGCGCTTTACCTGTACATGCT
CGGTGTGGACGTGTCCATTCGACGCCAGAGAGTGGGCACCCGCCTGGTGG
AGGCCACCATTGAGCTGGGTCGCCAGCGTGGATTTCCCGTCGTCACATCT
ACCTGCAGCAACCAGAACTCCAAACGCCTTATGACCGCCCTAAACATGGA
GTGCATACTCACAAAGGATTACGCGGACTACAAGGACGAGCACGGGGAGA
TCGTCCTGCGGGCATCCGAGCCACACACCTCCGCCAGTGTCGTGGCCATA
CGACTGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCGC
CCTGCACTCATCGCAGTACTGTTGTAATTCATTAGCATTCTGCGACATGA
AGCATCACAAACGGCATGATGAACCTGAATCGCAGCGCATCAGCACCTTG
TCCGCCTTGCGTATAAATATTTGCCCATGTGAAACGGGGCGAAGAAAGTT
GTCATATTGCCACGTTAATCAAACTGGGTGAACCTCACCCAAGGATGCCT
GAAACGAAAACAATTCCATTACTAAGAATTGGCAGTTCACGGTAAACGC
UFO07979.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:35:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AANATL2-RB | 964 | CG9486-RB | 18..665 | 9..656 | 3240 | 100 | Plus |
| AANATL2-RA | 857 | CG9486-RA | 18..665 | 9..656 | 3240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:35:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6255876..6256523 | 9..656 | 3240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:35:35 has no hits.
UFO07979.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:35 Download gff for
UFO07979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9486-RA | 18..669 | 9..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:46 Download gff for
UFO07979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9486-RA | 18..669 | 9..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:27 Download gff for
UFO07979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AANATL2-RA | 18..669 | 9..661 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:27 Download gff for
UFO07979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6255876..6256528 | 9..669 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:46 Download gff for
UFO07979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6255876..6256528 | 9..669 | 98 | -> | Plus |
