UFO07980.5prime Sequence
1057 bp (977 high quality bases) assembled on 2011-07-17
> UFO07980.5prime
CAGTCGACATGTTGGCGGATAGTGCAACTTTGACTTTAGCTATCTTTGTA
GGTACGTCTGTTGTGCTTGTTTCGGTTTCATCTTCAAGTTTGTCGGAAAT
TAAGCCGATGAACAACGGACATATCGTGACGCCTTTGGGATGCCATCGTC
GTGTATACACGTATAAAGTGACACAGTCCGATCTTCAAGGACACGAGTGT
TGGGACTATGTAAGCGTTTGGTCGTGTTGGGGACGATGCGACTCAAGCGA
AATTTCCGATTGGAAGTTTCCTTACAAGCGTTCGTTCCATCCTGTTTGTG
TCCACGCCCAGCGGCAGCTGGTAGTAGCTATCCTAAAGAATTGTCACCCT
AAAGCAGAGGACAGCGTAAGCAAGTACCAGTACATGGAGGCAGTGAACTG
TCACTGCCAGACGTGCTCCACACAGGATACCAGCTGCGAAGCTCCGGCCA
ATAATGAAATGGCTGGGGGCAGCAGGGCAATCATGGTAGGCGCCGATACC
AAAAACTTGGACTATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGA
GGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAAT
TACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCAT
TCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCA
GCGGCATCAGCACCTTGTCGCCTTGCGTATATATTGCCCATGGTGAAACG
GGGCGAGAGTGTCATATGCCACGTTAATCAACTGTGAACTCACCAGGATG
CTGAGACGAAAACTATCTCATAACCCTTAGAATAGCAGTTCACCGTACAC
GCCAATCTGCATATTGTGTAGACTGCGAATCGTCTGCAATTACTCGAGCG
ATAACGT
UFO07980.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:35:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gpb5-RA | 657 | CG40041-RA | 31..537 | 9..515 | 2535 | 100 | Plus |
| Gpb5-RC | 734 | CG40041-RC | 131..614 | 32..515 | 2420 | 100 | Plus |
| Gpb5-RD | 697 | CG40041-RD | 79..577 | 9..515 | 2405 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:35:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 23311861..23312344 | 32..515 | 2420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:35:39 has no hits.
UFO07980.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:36 Download gff for
UFO07980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gpb5-RA | 46..562 | 9..524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:47 Download gff for
UFO07980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gpb5-RA | 31..547 | 9..524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:27 Download gff for
UFO07980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gpb5-RA | 31..547 | 9..524 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:27 Download gff for
UFO07980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 23311778..23311800 | 9..31 | 100 | -> | Plus |
| 2L | 23311861..23312344 | 32..515 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:47 Download gff for
UFO07980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2LHet | 167293..167315 | 9..31 | 100 | -> | Plus |
| 2LHet | 167376..167859 | 32..515 | 100 | == | Plus |
