UFO07985.5prime Sequence
1081 bp (1007 high quality bases) assembled on 2011-07-17
> UFO07985.5prime
CAGTCGACATGGCAAAGATGTCCAAGTCATCGCGTAGCTTCAAGCTGCCA
CCAGTCAGCTCCTCTTCCGTGTCCTCGGTCTCCGGCAGCGAATCCGGGCA
AGGATTGGAAGACATGTTGCACGTGACAAAGGTGCGAACTTCCCAGGTGG
ACAACGCAGAGCTTTTCATGTACGGCGACGGGCCCAAAAAATCGAATTCA
GATCTGCAGAAAAAGGTCAGTACACCCGATCCGGAAGAGGAGGTGTCAAT
GGAACCACCATTTGTGGCATTGGTCAGCAATTTGCCAATGGAGTGCACTG
AAGGCGAGTTGCGGAAAGTGTTCACCAGTTTTTCGATCCGTTCTCTAACC
ATTCCGAAGAAGGGAAAGCGACCCAAGGGATTTGCGTATGTGGAAATGGA
TTCCCGCGAGGATCTCGTTCGTCTGCTCAAAATGGATAAGCTTAAGTGCC
GTGGTCGTTGTCTTATGGCCAAAATAGGCCAATTGCCACCCGAACCACCG
ACAAAGGCAGCTGGAGATGGCTTTTCATTATTTACTTGTTCAGGCAGGCA
ATTTGATATAAACTCTAGCCATTATTCGGCCAGTGTCAGTGATCTCAGCA
CCATCGATTCGCCAATCTCTGCGAGGAACTCACCATTTCCTTCGGAAAGT
GAGTCGTCCTTTTTCGGCAGGGATAATCCTATAAAAAGAATTCCTAGTAG
CACTGAGGAAGTGGAACGCCGTATGCAAATTCGTCTTCAGAAACTAGCCG
AATTCGAAAATTCTGAATCGGAGAGAATTAAGAGTGAATGCGAGGATGAT
CCGGATGCCTTCATGTCCTGAGCGATGCCCTAGACGAGATTAGAAAATCT
GAACTGATTCCTCAATCATACTGAATCCGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATATCATATCATAATCA
TAATCACACTAGCTAGGAGATCTGGTCATGACTAGTGCTTGGATTCTCAC
AATAAAAACGCCCGGCGGCACGGAGCGCTCTGAACCAATCGGATGGAGTT
CGAGGTCATACTGAATCTATCAAGGATCCAG
UFO07985.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:35:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11726-RA | 984 | CG11726-RA | 82..954 | 9..878 | 4290 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:35:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11394771..11395643 | 9..878 | 4215 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:35:54 has no hits.
UFO07985.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:39 Download gff for
UFO07985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11726-RA | 82..960 | 9..882 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:55 Download gff for
UFO07985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11726-RA | 82..960 | 9..882 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:34 Download gff for
UFO07985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11726-RA | 82..960 | 9..882 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:34 Download gff for
UFO07985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11394771..11395649 | 9..882 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:55 Download gff for
UFO07985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11387871..11388749 | 9..882 | 99 | == | Plus |
