UFO07991.5prime Sequence
1143 bp (1015 high quality bases) assembled on 2011-07-17
> UFO07991.5prime
CAGTCGACATGGCTTGTGGCAGTGAAGCGATCATCATGAAGTTTCCCATG
CACATGCGTGCCCATCTCCTGGCCGTCCTAAACGATTTTCGGAATACCGT
GGCTAAGGGTCAGTATCCGCACTTGCGTCCAGCTTCCCGGATGGCAACAC
TCCGGTGGCACGAGGAACTGGCCGGGTTGGCCAAGTTTGCCTTGAGGCGT
TGTGACTATATAGACGATTACTGCAGCAATACGGATGAGTTCAGCTATGT
GTCGTATATATATGGCAGTACCAAGTGGTTGCAACTGGAGAAGGATCCCA
TATCCGTTTTGGACTTTGTCTTGCAGTTTTGGATGGATGATGTTAAGGGC
TGCACGATGGCCCACATCAATGCCGAGAAACCGGCCAAGGATGGACAGTG
TCGCGGCTACTTCACCCAGCTGGTCCAAGATTTGGCTGCCCATGTCGGCT
GTGCCATGATGCTGCGAAAAGGCCAAACGAGCGGACTCTATCAGTACGGT
GTCCTATGTCACTTTTCGCGCGGAAAGATCGCCAATGAGCTGGTCTACCG
GGCAAGTGCTCATCCGGGAAGTCGCTGCTATGCGGGAACCCACTCCATAT
ATGAGGGGCTCTGCTCACCCGAGGAGCATGTTAATCCCAATGCCCTGCAA
TTGGGCGAGCTTAATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAT
TACGCCCCGCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATC
TGCCGACATGAAGCCATCACAAACGCATGATGACCTGATCGCAGCGCATC
AGCACCTTGTCGCCTGCGTATAATATTGCCATGTGAACGGGGGCGAGAGT
TGTCATATTGCCCGTTTATTCAAACTGTGAACTCACCCAGATTGCTGAAC
GAAAACATTCTCATACCCCTGTCAGGGAAAGCCAGGGTTTTCC
UFO07991.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:36:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30486-RB | 845 | CG30486-RB | 147..803 | 9..665 | 3285 | 100 | Plus |
| CG30486-RA | 859 | CG30486-RA | 166..817 | 14..665 | 3260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:36:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12848398..12848778 | 394..14 | 1905 | 100 | Minus |
| 2R | 25286936 | 2R | 12848076..12848347 | 665..394 | 1360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:36:10 has no hits.
UFO07991.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:42 Download gff for
UFO07991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30486-RB | 130..786 | 9..665 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:23:06 Download gff for
UFO07991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30486-RB | 130..786 | 9..665 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:39 Download gff for
UFO07991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30486-RB | 147..803 | 9..665 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:39 Download gff for
UFO07991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12848398..12848784 | 5..394 | 98 | | Minus |
| 2R | 12848076..12848346 | 395..665 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:23:06 Download gff for
UFO07991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8735581..8735851 | 395..665 | 100 | <- | Minus |
| arm_2R | 8735903..8736289 | 5..394 | 98 | | Minus |
