UFO07992.5prime Sequence
1117 bp (1032 high quality bases) assembled on 2011-07-17
> UFO07992.5prime
CAGTCGACATGTTGGCTCTCCGCTTGTTTGTACTGCTGCAGTGCAGCCTG
TTGGTTCTGGCTGGCGTTTGTTTAATACCACAGCCCGTTAAGAGGCAGCG
ATCGCTTGAGGATGTTATAAAGAATCCCTGGAAGCTATCACCCCGCCTGG
ATGGCCGTATTGTGGGCGGTCACCGCATCAACATCACCGATGCACCACAT
CAGGTTTCGCTGCAGACTTCGTCCCATATTTGCGGCGGTTCTATTATATC
CGAGGAGTGGATATTGACTGCCGCCCATTGCACATATGGTAAAACGGCAG
ATCGCCTGAAAGTGCGACTCGGAACCAGCGAATTTGCTCGCAGTGGCCAA
CTTCTGCGGGTGCAGAAGATCGTGCAGCACGCCCAGTTCAACTACACCAA
TGTGGACTACGATTTCTCGCTGCTTCAGCTAGCTCATCCCATCAAGTTTG
ACGAGACCAAAAAGGCGGTCAAGCTGCCCGAGTCTCAGATGAAATACATG
GACGGGGAAGCTTGCTTCGTGAGTGGTTGGGGCAACACCCAGAACCTGCT
GGAGTCCCGCGAGTGGCTGCGTCAGGTGGAGGTGCCTCTGGTCAATCAGG
AGCTTTGCAGCGAGAAGTACAAACAGTACGGCGGCGTCACCGAGCGAATG
ATCTGTGCTGGATTTCTGGAAGGCGGAAAGGATGCGTGCCAAGGCGATTC
CGGCGGTCCGATGGTCAGTGAATCGGGCGAGCTGGTGGGCGTGGTTAGCT
GGGGCTACGGTTGCGCTAAGCCCGACTATCCGGGTGTCTACTCAAGAGTA
AGTTTCGCACGGGATTGGATCAAGGAGCACAGTGGTGTCGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGTCATAATCATAATCA
TAATCATATCATAATCACAACTAGCCTAGAGATCCTGGTCATGACTAGTG
CTTGATTCTCACAATAAAAACGCCCGGCGGCAACGAGCGTTCTGAACAAT
CCAGATGAGTTCTGAGTCATTACTGGATTCTATCACAGAGTCAGGCGAGC
TCGATATCAAATTACGGCCCCGGCCTGCCACTCAATCGCCAGATACTGGT
GAATCCATAGCCATTCT
UFO07992.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:36:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31954-RA | 978 | CG31954-RA | 30..861 | 8..839 | 4160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:36:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3509175..3509727 | 839..287 | 2765 | 100 | Minus |
| 2L | 23513712 | 2L | 3509795..3510073 | 286..8 | 1395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:36:14 has no hits.
UFO07992.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:42 Download gff for
UFO07992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31954-RA | 6..847 | 1..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:23:08 Download gff for
UFO07992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31954-RA | 26..867 | 1..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:40 Download gff for
UFO07992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31954-RA | 26..867 | 1..847 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:40 Download gff for
UFO07992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3509795..3510077 | 1..286 | 98 | | Minus |
| 2L | 3509169..3509727 | 287..847 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:23:08 Download gff for
UFO07992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3509169..3509727 | 287..847 | 99 | <- | Minus |
| arm_2L | 3509795..3510077 | 1..286 | 98 | | Minus |
