UFO08016.5prime Sequence
1132 bp (1033 high quality bases) assembled on 2011-07-17
> UFO08016.5prime
CAGTCGACATGGACAAGCGATTCAAGTGGCCGCCCAAAAAGCGGGCCAAC
TACTTGGAATCGCCCTATCCCCACATACCGTCGCGTGGCCGCCAAAGGAA
TCTGCACGGCCATCCCAATCAGACGCAGCATCTTCATCAGCATCCCGGGA
AGATCTATGAGCGCCAGCAATATGGCAATGGTCGTGGAGGACATGGCGGG
GGTAATAACAACTACCGAAAGCTTTTGCATTCGCTGCCAGCTGAGCATGG
TGGCGGAGCCATGGCTCCTCCTTCCTCCGGCGGAACCGTGTGTGCCGGCG
CCGATATGGTCAAGCTCATCTCGGAGAACAACAACCTGAGGCGCATGGTT
ATGTTGAACTTAAACCTGATGCAGGAGCAGACGGACAGCATAGCGGCCAA
GGACAAGGAGCTGGACGACCAAAGCGCTAAGATGAGCGTGGTGAAGGCGC
AGAATGAGGAATTAAAGCAGGCCGTTGCTCAGTTGGAGGCCGCCAACCAG
GAACTATGCAAACAGCTGCGGCGAAAGAACCAGCGAAGGAACGACAATGA
CGACGACGACGATGATCCCCCACTGCCACCTGCTGCCCCGCAGCAGAAGT
TGATACGTTGTCATGCTGAGACGCAAACTGTGTTTCGGGAGCGGGAACAG
GGCACACAAACGATAGATGCGCAGCCTCAATTCGCGAATGCACTTCCCAG
GGGTATCAACATGAAGGAGTCTCCCGCTCTGGACCATCACGCTGGAGCGG
TAACGAATCAGCCAGCCAGCAAACGCTCGGAGAGCAAGGCCGCGGTGAAT
TCAACGGTAAAAAGGTGAGCACGTTTATTCTCCAGCGCATGAATCAGACT
TCGAGCACCACATCCACGAGCAAACGGAAGTAGCAGAGGAGCACGAGATG
GAGGCACATAAGAGCAAATATCTCAGAGAGGACCAACTGGTCGCTGAGAA
GATCATCTGCATATGCAAGAAGTGCACCACCGAGGAAGTCGTTGGAGGCG
ATTTCTTTCATGATGCTTTGGAATCAATTGAAATGAAGTGGTCACCGAAG
AGCTGGTTGATATTGGAGGAGCATGACGTTCCGTGGATGCCACGCCCTTT
CAGAAGATGTATGACAGACGACGAAATGACGA
UFO08016.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:37:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| msl-1-RB | 3757 | CG10385-RB | 375..1465 | 8..1092 | 5180 | 98.8 | Plus |
| msl-1-RA | 5021 | CG10385-RA | 375..1465 | 8..1092 | 5180 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:36:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18687336..18688426 | 1092..8 | 4955 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:36:59 has no hits.
UFO08016.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:50 Download gff for
UFO08016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msl-1-RA | 364..1474 | 1..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:23:29 Download gff for
UFO08016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msl-1-RA | 368..1478 | 1..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:00 Download gff for
UFO08016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msl-1-RA | 368..1478 | 1..1104 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:08:00 Download gff for
UFO08016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18687323..18688430 | 1..1104 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:23:29 Download gff for
UFO08016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18687323..18688430 | 1..1104 | 98 | | Minus |
