UFO08021.5prime Sequence
1159 bp (1030 high quality bases) assembled on 2011-07-17
> UFO08021.5prime
CAGTCGACATGCATAGTGCTGACTTAACTAGCCACACCGATGTGACGGAA
ACCACCAATCTTGCCGCCATTGAGCAGTTGAAGGAACAGCGATTCAACGA
GAAGAATCTGATCATATACAATCCGCCTGGAGAGAATGACGAACTTTCCG
CCAGATTCCTGCGCAGCCTAGCTTTTGCCACCTTCAAGCGAAGATCGCCC
GCATTTTTGAGGGATTTGATCACATTCCTACAGGATCGTGAGGCGGATAT
AATTGAACAGTGCGGGGACTATGCCCATTTCGATTTGAAGCGCACCATCT
GGAGCCTGGAGCTGCTGCGCGATGATATAATCAACAACAGGGAGTTCCAG
ATAATTCGCGTCAAGTCGCCGGACACTGACAGCTGGAACTCGTTCCTCAA
GGGTCTTGGAGAGGACAGAAGGCAGTGGTTTTCGGCAATTTGGCTGCATG
CGGATTGCTACATGTACCGCCGCATTTGGTCGATCTTCCAGCGATCCGAA
ACCCTGAAAAATTATGATTACTTCGGTGATCAAAAGACGTCCATTGTTAC
CAATGTGGCGCCACTGATGAGGGACATCCTAGTCTCAACCAAAGGCATTA
AGCGCAGCCAGGAGGACTTTCAGTATCTCCTAAAACTATCTACGTGGTCC
AATCACGGTGACCTAAACATCACAAGAAGGGGTGCGCATGACAAAATCTA
TAAACAGATTGCCAAATACGACATTGATTTGCTGGCGGATCAGTCGTTCG
ATGTTTGGCAGGATCTCATCGAGGCCAGTGCGCCCGTCTACGTGGACATC
GTGTGCGACAATGCGGGATTTGAGCTCTTTGCGGATCTGCTGCTGGGCGA
GTACATCATAGAATCGGGCTTGGCCAGTCGGGTGCGGTTCCATGTGAAGG
CTATACCGTGCTTCATCTCGGATTGCACGCACAAGGACTTTACTGGCTAG
TAAAGTTTCTACGCAAGCACGAGTTCCAGGGATTGATGCCTTGGTAAGCG
GATACGGGCTATATCAGGATCGTTCTTTATCCTGGTGCGAACAAAGCTAC
TTCTGGACAGTGTTCACGACTACGCAGAATGGAGCGGGTGCAACCTGCCT
GTTTGTCTCAACTTAGCAGGCATTCTGGGTAATCTTAAGAAGATTTCAAC
CTACCGGAA
UFO08021.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11475-RA | 1562 | CG11475-RA | 104..1267 | 5..1159 | 5185 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:37:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22070085..22071183 | 1096..5 | 4905 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:37:15 has no hits.
UFO08021.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:40:53 Download gff for
UFO08021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11475-RA | 100..1223 | 1..1117 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:23:37 Download gff for
UFO08021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11475-RA | 100..1223 | 1..1117 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:08 Download gff for
UFO08021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11475-RA | 100..1223 | 1..1117 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:08:08 Download gff for
UFO08021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22070064..22071186 | 1..1117 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:23:37 Download gff for
UFO08021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17957569..17958691 | 1..1117 | 97 | | Minus |
