UFO08038.5prime Sequence
1121 bp (1020 high quality bases) assembled on 2011-07-17
> UFO08038.5prime
CAGTCGACATGATCGGAGTTCACTTCGTGTTTTTGTTGCTTCTCGGCGTG
GTTGCCTCCACCCAGGGAGCTAACATTTTGGGGCTCTTCAGCAGTCACAG
TCCGTCGCATCTGATAATCCACATGTCGGTGGCCAAGGCACTGGTCAAAG
CTGGACACAATGTGACCGTGGTGTCCATGCTGAAGCCCAAGGTGACGCAC
AAGGACATCCACCTGATTGTGGTGCCTATGAAGGAGGAGCAAGAACGCAT
CATGGAAGACCAAATGACCGAAATGGCCGGGCAAAAGAACTCACTGGTCA
GCACTATGTATCGCCTTCTAACCAGCATGGATGTTATGATCAATGCCCAG
GCGGAACTCCTATCCGACCCTCGGTTTCAGCGCATTTACGAGACCAAATT
TGATTTGATGATTTTGGGTTACTTCATCAACGACTTTCAACTGGGTGTCG
CCCATAAGCTAAAGGTGCCGGTAATTATTAATTGGATGTCGGCACCTGTT
CCGGCAATCGATAAGTATACGGGTAATCCCTCGGAGTTATCCTATGTGCC
CCTCATGGGAACTGTGGCCACGCAACCAATGGGCTTCCTCAAACGAACTG
AAAACGCTCTCAAATCCCTGCTCTTCGAATTCATTTTTGTTGTGTTTGAT
TACAAATTGACACGCATTTATAATGACGTCTTTCCGGAACAAGATATGCC
CACACTGAAGGAGTTGAGGAAGAATATCTCCATGGCCTTTGTCGGCTCCC
ACTTAATCAGTGAAGGACCTATTCGACCCCTGGTGCCAGCGCTAATCGAA
ATCGGAGGAATACAAGTAAAGGATAAGCCGGATCCTCTGCCCAAGGATAT
CGATCAGTTCATAAGCAATGCCAAGCAAGGTGCTGTCTTCCTGTCACTCG
GCTCCAATGTCAGAGTTCCACTGTAAGCCAGAATCGTACAGATCATCTTT
AAGTCCTGTCCGAACTGAAGAGACGTATCTGGAAATGGGAGGATTTGGAG
AACACACCCGGGTACTCCTCATATTCTTTTATAGGACTGGCCTGCCCCAG
ACGAATAACTGTCCAATCCGAATAACCAAACCTCTTTTATCACACACGCC
TGGAAGGGCGGCCAATACCGG
UFO08038.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:38:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt36Ba-RB | 1799 | CG13270-RB | 26..1135 | 9..1112 | 5020 | 97.8 | Plus |
Ugt36Ba-RA | 1617 | CG13270-RA | 26..1135 | 9..1112 | 5020 | 97.8 | Plus |
Ugt37c1-RA | 1743 | CG8652-RA | 128..504 | 99..475 | 430 | 74.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:38:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16794236..16795345 | 9..1112 | 4745 | 96.8 | Plus |
2R | 25286936 | 2R | 16844535..16844911 | 475..99 | 415 | 74 | Minus |
3R | 32079331 | 3R | 12743486..12743612 | 187..61 | 185 | 76.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:38:08 has no hits.
UFO08038.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:02 Download gff for
UFO08038.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt36Ba-RA | 18..1035 | 1..1011 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:10 Download gff for
UFO08038.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt36Ba-RA | 18..1035 | 1..1011 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:32 Download gff for
UFO08038.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt36Ba-RA | 18..1035 | 1..1011 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:08:32 Download gff for
UFO08038.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16794228..16795245 | 1..1011 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:10 Download gff for
UFO08038.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16794228..16795245 | 1..1011 | 98 | == | Plus |