UFO08053.5prime Sequence
1118 bp (1032 high quality bases) assembled on 2011-07-17
> UFO08053.5prime
CAGTCGACATGAATCATCTTAAGTGGATGGGCCACTCATCCACGATAATG
GACATCCAGCGCTCGCTGCGTAATGATAATCAGCACTGCGAGGTGGTGCT
GGCCTCCAGGGACGGCGTTCGAGTGCGCGCCCATCTATTCGTGCTAAGCA
CTTGCAGCGAACTGATGCGCAACCTCCTGGTGGACGTTCCGCGCGGCCAG
GAGGCAACCATAATGCTGCCCGACATCCGCGGAGATTTGCTGGAGTGCAT
GCTGTCCTTCATTTACATGGGCGAGACTAGCCTGCCCTCCGCGTCGCTCC
CCGAGTTCCTGGAGGCCATTAACCTCCTCGGCATCAAATCTGCCATCAGC
TTTGAGTGCAATCCATCGGCTAGTCCACCCAGTGTCGATGTAGAGAACCA
TTCGTTAGCCGTGGAGTCGGCCAAGTCCATTACAGGACTCCAAATCGCTG
AGGCCGAGCTGCTGGACGACGAGGAAGAGCCACATCCGATGGTCTCCGTC
CCAGCCACTACACTCGCGGGTTCTCAACACCAGCCCAGCCATTCCAGTCG
GTCATTGGAGTACATTGATGTCTACGAGCCGCCGAAGATCACCTACTCCA
TCGAGCACATGGACGGAAGTTCCAGCGGCAACCAATTTATACTCACCGAG
AACACGGGCACTTTCACCATAACGCAGTCAGCATCGAGTTTGTCCAAAAT
TGAGGCAGATGAAACGGGTACCAGTGGCGCTGAAGTGGACCTGGGCGATG
ATGACGTGGATGCGGACCTTGCTGAGGATTCTGAGGAGCACGAATCACAA
ATGATCGACGAGGAGTTCGCGCAAGCCGATCCTCTTATGGAACTAGAAGC
TGGTACTGAAATGGACGACGATGACGACGTGCACGACCAACTTGTGGACG
AGGAAATAGACGATAGCCCGCAAGTTGGGGCGGGGGAAAGACGCGATCCG
TCGCCCCATAGTGCGAAGCTGTCAACGATTGTCCGATGCAGCAACGCGAT
CAGCAGTCGCAGCTCTGAAACGTGAGTAAAGACGATTCACGATGCTTTGA
TCTGGCGGCCGACGCGTATCACTCAAGGCTAGCTACAAGCGCGACGATGT
GAATTCAGACGTCCTTGG
UFO08053.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pfk-RA | 1958 | CG15812-RA | 107..1180 | 9..1066 | 4925 | 98.3 | Plus |
| pfk-RB | 1913 | CG15812-RB | 64..1135 | 11..1066 | 4915 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:38:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3160170..3161121 | 11..960 | 4585 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:39:00 has no hits.
UFO08053.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:10 Download gff for
UFO08053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pfk-RA | 96..1189 | 1..1078 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:35 Download gff for
UFO08053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pfk-RA | 100..1193 | 1..1078 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:53 Download gff for
UFO08053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pfk-RA | 100..1193 | 1..1078 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:08:53 Download gff for
UFO08053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3160161..3161254 | 1..1078 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:35 Download gff for
UFO08053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3160161..3161254 | 1..1078 | 97 | | Plus |
