UFO08057.5prime Sequence
1147 bp (1024 high quality bases) assembled on 2011-07-17
> UFO08057.5prime
CAGTCGACATGATGGTCAAACTTCTCCTGCTGTTCCTGGTATGCTGGAGT
GCTCTTCCTTTGGAGTCATCTCCCTTGGGTAACCGATATAACCTAGAGAT
CGGTGAAAAGCAGTACTACATTTCGTTGGCAAAGACCAACTGGTTCGAGG
CAAGCAACCACTGTCGTCAGAATGGCGGATTTCTTCTCAATTTGGAGAGC
AGAGAGGAACTGGAGCTCCTTAGCCCCCACCTTCACCCAGCCTACAGCTA
TTGGCTATCCATCAATGACCTCGGCGAACGGGGCGTATACGTGTCGGAGG
CCACTGGTCTAGAGGCTCCGTTTCTTAACTGGTCCGCCGGAGAGCCGGAC
AACAGCAGTGGCTACGATCGATGTGTCGAGCTGTGGTTGTCGACAACCTC
CTTCCAGATGAACGACCTCCCATGCTATAGCTCCGTCGCCTTCATTTGCC
AGCTTAACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATCATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
CGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
ACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT
CAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGG
CGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTC
ACCCAGGGATTGGCTGAGACGAAAACATATTCTCAATAAACCCTTTAGGA
AATAGGCCAGGTTTCACCGTAACACGCACATCTTGCGAATATATGGTGTA
GAACTGCGGAAATCGTGTGTATTCACTCCAGAGCGATGAAAACGTTTCAG
TTGCTCATGGAAACGGTGTAACAGGGTGAAACCTATTCCCATATACACAA
GCTCCCCCGTCTTCATGCCTTCGATCGGATGGACATTTCATCAGGCG
UFO08057.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-37Db-RB | 548 | CG33533-RB | 23..472 | 9..458 | 2250 | 100 | Plus |
| lectin-37Db-RA | 562 | CG33533-RA | 23..472 | 9..458 | 2250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:39:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19419307..19419677 | 88..458 | 1855 | 100 | Plus |
| 2L | 23513712 | 2L | 19419097..19419179 | 9..91 | 400 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:39:11 has no hits.
UFO08057.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:12 Download gff for
UFO08057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-37Db-RB | 17..472 | 1..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:43 Download gff for
UFO08057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-37Db-RA | 17..472 | 1..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:58 Download gff for
UFO08057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-37Db-RA | 17..472 | 1..458 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:08:58 Download gff for
UFO08057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19419091..19419175 | 1..87 | 95 | -> | Plus |
| 2L | 19419307..19419677 | 88..458 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:43 Download gff for
UFO08057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19419091..19419175 | 1..87 | 95 | -> | Plus |
| arm_2L | 19419307..19419677 | 88..458 | 100 | == | Plus |
