UFO08060.5prime Sequence
1151 bp (1037 high quality bases) assembled on 2011-07-17
> UFO08060.5prime
CAGTCGACATGATGTTTAGCTGGACTCGACTGGCCAATCCGCTAAAGATG
AGCTGCCAGTTAGTAACGCATTTCTCGACAGCCCCCCCTCCGAATGCAAA
ATTCTGGACGAAGCTGTTCGGAAAGTACCTGTTGCTGACGAATACCATCG
GATCGGGACTGCTCCTCGCCATCGGCGATGCAATTGCTCAGCAGTACGAG
AGGTTTGGTGAAAAGAAAGCCTTTGACTACTCTCGCTCAGGATGCATGAT
GATTACGGGCTCGGTGATTGGTCCGATTCAGCACGGCTTCTATCTGCTGT
TGGATGGGGTTCTACCGGGCACTAGTGGATGGGGTGTGCTGCATAAGATA
CTCGTGGATCAGTTAATCATGTCACCCATCTATATATTCCTGTTTTTTTA
CGTCAGCAGCTTGCTGGGCGGAAAGAGTTTCGTGGAGTGCAATAGCGAGC
TGTCCGAGAAGTTCCTCTACACATGGATGTTGGACTGCTGCTTTTGGCCG
GGTCTGCAATATCTTAACTTCCGCTTCCTCAATTCCCTCTATCGCGTGGT
GTTCGTCAATGTAGCCAATTGCGTGTACGTCGTTCTGCTTTCTCATATAA
AGTACGGGGTTTCCAACCACGATCCCGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAAT
TCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAAC
CTGAATCGCCAGCGGCATCAGCACCTGTCGCCTTGCGTATATATTTGCCC
ATGGTGAAAACGGGGGGCGAAGAAGTTGTCATATTGGCCACGTTTAAATC
AAACTGGGTGAACTCCACCAAGGGATGCTGAAACGAAAACACATATTCTC
AATACTTAAGGAAATGCAGTTCACCGTAACGCCACTCTTGCACAAATATA
T
UFO08060.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:38:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32263-RA | 803 | CG32263-RA | 145..762 | 9..626 | 3090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:38:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3810353..3810970 | 626..9 | 3090 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:38:44 has no hits.
UFO08060.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:08 Download gff for
UFO08060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32263-RA | 145..767 | 9..634 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:27 Download gff for
UFO08060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32263-RA | 145..767 | 9..634 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:47 Download gff for
UFO08060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32263-RA | 145..767 | 9..634 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:08:47 Download gff for
UFO08060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3810348..3810970 | 9..634 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:27 Download gff for
UFO08060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3810348..3810970 | 9..634 | 99 | | Minus |
