UFO08065.5prime Sequence
1122 bp (1012 high quality bases) assembled on 2011-07-17
> UFO08065.5prime
CAGTCGACATGGCGACCCATAATGTCCATTCCTGCGAATTCGAGGTATTT
GGCCGCGTGCAGGGCGTCAACTTCCGGCGACACGCCCTGCGAAAGGCCAA
GACACTGGGTCTTCGCGGCTGGTGCATGAACTCCAGCAGGGGCACCGTGA
AGGGTTACATCGAAGGTCGTCCGGCCGAGATGGATGTGATGAAGGAGTGG
CTCAGGACGACGGGCAGTCCGCTGTCCAGCATCGAGAAGGTGGAGTTCAG
TTCTCAGCGTGAGCGCGATCGCTATGGCTATGCCAACTTTCATATCAAGC
CCGATCCGCACGAGAATCGCCCAGTTCATGAAGGATTGGGCAGTAGTTCC
AGCCACCATGATAGCAATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC
TGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCA
AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG
CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCG
CCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTG
AAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACT
GGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAA
ACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTACACGCCACATCTTGCG
AATATATGTGTAGAAACTGCCGGAATCGTCGTGTATTCACTCAGAGCGAT
GAAAACGTTTCAGTTGCTCATGGAAACGGTGTACAGGGTGACACCTATCC
CATATTCACCAGCCTCACCGTCTTTCATGCATACGAATCCGGATGAGCAT
TCATCAGGCGGGCAAGAATGTGATAAGGCGGAATAAACCTTTGCCTATTT
TCCTTACGACTTAAGGCGTATT
UFO08065.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acyp-RB | 570 | CG16870-RB | 119..478 | 9..368 | 1800 | 100 | Plus |
| Acyp-RA | 514 | CG16870-RA | 119..478 | 9..368 | 1800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:39:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13912201..13912560 | 9..368 | 1800 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:39:29 has no hits.
UFO08065.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:16 Download gff for
UFO08065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acyp-RA | 56..426 | 1..374 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:55 Download gff for
UFO08065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acyp-RA | 112..482 | 1..374 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:09:05 Download gff for
UFO08065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acyp-RA | 112..482 | 1..374 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:09:05 Download gff for
UFO08065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13912194..13912560 | 1..368 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:55 Download gff for
UFO08065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13912194..13912560 | 1..368 | 98 | == | Plus |
